Gene Daci_5822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5822 
Symbol 
ID5751443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6478544 
End bp6479269 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content71% 
IMG OID641300954 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001566835 
Protein GI160901253 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.367586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.455347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGCTGC TGGGCGCGGC CCTGGTCCTG GCCCTGTGGT GGGTGGGCGG CGCGCTGCTG 
GCGCGCAGCA CGCCCGTGGC TGCGGCCTTC GCGCCCTGGC CTTCGCTGCA GGCGCTGGGC
CAGCTGCTGA CGGGCGCCGA CATCTGGATG CACACCCTGC TGAGCCTGCA GCGCGTGGCC
GTGGGCCTGC TGCTGGCCTT CGTGGTCGGC GTGCCGCTGG GCGTGCTGGT GGGTCTGTCG
CGCGGGTTCT CGCAGGCGTT CTCGCCCGTG TTCCAGTTCC TGCGCATGAT CTCGCCGCTG
TCGTGGATGC CCATTGCCGT GATGGTGCTG GGCGTGGGCG ACGCGCCCGT GTACTTCCTG
CTGGCCTTCG CCGCCGTCTG GCCCATCCTG CTGAGCACGG CGGCCGGCGT GGCCCAGCTG
GACCGCAACT GGCTGCTGCT GGCACGCAGC CTGTCGGCCA CGCGCACCGA GACCGTGCTG
CGCGTGGTGC TGCCCGGCAT CACGGCCCAG ATCCTCACGG GCGTGCGCCT GGCCATCGGC
ATCATCTGGA TCGTGCTGGT GCCCGCAGAA ATGCTGGGCG TATCGGCCGG CCTGGGCTAC
TTCATCCTCG ACACGCGCGA CCGCCTGGCG TATTCGGAGC TGATGGCCGC CGTGGTGCTG
ATCGGCGCCC TGGGCTATGC GCTGGACCAT GCGGCGCGGT GGCTGCACCA GCGCTGGATG
CACTGA
 
Protein sequence
MPLLGAALVL ALWWVGGALL ARSTPVAAAF APWPSLQALG QLLTGADIWM HTLLSLQRVA 
VGLLLAFVVG VPLGVLVGLS RGFSQAFSPV FQFLRMISPL SWMPIAVMVL GVGDAPVYFL
LAFAAVWPIL LSTAAGVAQL DRNWLLLARS LSATRTETVL RVVLPGITAQ ILTGVRLAIG
IIWIVLVPAE MLGVSAGLGY FILDTRDRLA YSELMAAVVL IGALGYALDH AARWLHQRWM
H