Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5818 |
Symbol | |
ID | 5751439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6473511 |
End bp | 6475388 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641300950 |
Product | X-Pro dipeptidyl-peptidase domain-containing protein |
Protein accession | YP_001566831 |
Protein GI | 160901249 |
COG category | [R] General function prediction only |
COG ID | [COG2936] Predicted acyl esterases |
TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.412169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA CATCAATCAC CGAGCTGGGC GGCGTGGTCC GCCACAGCCT CACCGTGCCC ATGCGCGATG GCGTGCGCCT GGCCACCGAC CTGTATCTGC CCGAGAACCT CGGCCCCCAC GAACCCGGCC CGCTGCCCGT GCTGCTGGAG CGCACGCCCT ACGGCAAGAA CGAGGAAACG CGCCGCGAGC GCAGCGCGGC CAACCCCCTT CCCATGCGCC GGGGCGAGGT GGCGGCCCGC TTTGCGCGCG AAGGCTATGC CGTGGTCGTG CAGGACTGCC GGGGCCGCTT CGGCTCCGAA GGCCAGTTCA CCAAATACCT GGGCGAGGCC CACGATGGCG CCGACACCCT GCAATGGATC ATGGAGCAGC CCTGGTGCAA CGGCAGCGTG GGCACCTACG GCCTGTCCTA CGCCGCACAC ACGCAGACTG CGCTGGCCAC GCAAAGGCCG CCGGGCCTCA AGGCCATGTT CCTGGAATGC GGCGGCTTTG CGAATGCCTA CCGGGGCGGC ATACGCCATG GCGGTGCCTT CGAGCTGAAG CAGGCCGTCT GGGCCCTGCG CAATGCGCGC AGCGGCAGCA ACCACCTGGA GCCCGCAGCG CGCCAGGCGC TGGAGCAGGC CGACATCGGC CGGTGGTGCC TGCGCCTGCC CTGGTCGCGC GGCGACTCGC CGCTGCAGTG GGCGCCCGAG TACGAGGACT ACCTGTTCAG CCAGTGGGAG CGCGGCAGCT TTGACGACTA CTGGCGCCAG CCCGAGCTGT ACGCCGCCGG CCACTACGGC GCCTTCGACG GCCTGGCCGT GATGCTGATG TGCGGCTGGT GGGACCCGTA TGCGCAGACC ACCACGGACA ACTACCTGGG CCTGTCGCGC GGCGATGGCC GGGTCCGCAT GGTGCTGGGC CCCTGGACCC ATGGCGAGCG CAGCGTCCCG CATGCGGGCG ATGTGGATTT CGGGCCCGAT GCCGTGCTCG ACGGCGCACT GGCCGAAGAC TACGTGGCCA TGCGCCTGGC CTGGTTCGAC CACTGGCTCA AGGGCCGGCC CATGCCCGCG CGCCAGCAAG CCGCCGTGCG CTACTTCCGC ATGGGCGGCG GATCGGGCGC GCGCACGGCC CAGGGCCGGC TGGACCACGG CGGGGCCTGG CGCAGCGCCG ACCACTGGCC CGTGCCCGGC ACGCAGCCCA CGGCCTGGCA CCTGCACGCC GACGGCAGGC TGGCCCGCGA GCCCGCGCCG CAGCCGGGCG TGCGCAGCTA CCGCTTCGAC CCGGCCTGCC CCGTGCCCAC CCTGGGCGGC TCCATCACCT CGGGCGAGCC GCTGATGTTC GCAGGCGCCT ACGACCAGGT CACGCACGAG AGCACCTTCG CCGCCCGCCC GCCCTACGGC CCGCTGTCCG AGCGTGGCGA CGTGCTGGTG TTCCAGACCG AGCCGCTGCA GCAAGACCTG GAGGTCACGG GCACCATCAC CATCGAGCTG CAGGTGTCCT CGTCCGCGCC CGACACGGAC TTCACCGCCA AGCTCATCGA CCAGTACCCG CCCAGCGCCG ACCATCCGCA GGGCTATGCG ATGAACATCA CCGACGGCAT CCTGCGCTGC CGCTACCGCA ACTCATGGGA GCAGCCCGAG CTGATGACGC CCGGCGAGGT GGTGGCCATC ACCATCGAGC CCATGCCCAC CTCCAACCTG TTCCGCAAGG GCCACCGCAT CCGCCTGGAC ATCTCCAGCA GCAACTTCCC GCGCTTCGAC GTGAACCCCA ACACCGGCGC GCCCGAGGGC AGTGCAGGAC CCATGCAGGT GGCGGTCAAC AGCCTGCACC TGGGCGGGGC GCATGTGTCG CGCGTGGTGT TGCCGGTGGT GGGAAGGCTG GTGGACAGGG CCGTCTGA
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Protein sequence | MSNTSITELG GVVRHSLTVP MRDGVRLATD LYLPENLGPH EPGPLPVLLE RTPYGKNEET RRERSAANPL PMRRGEVAAR FAREGYAVVV QDCRGRFGSE GQFTKYLGEA HDGADTLQWI MEQPWCNGSV GTYGLSYAAH TQTALATQRP PGLKAMFLEC GGFANAYRGG IRHGGAFELK QAVWALRNAR SGSNHLEPAA RQALEQADIG RWCLRLPWSR GDSPLQWAPE YEDYLFSQWE RGSFDDYWRQ PELYAAGHYG AFDGLAVMLM CGWWDPYAQT TTDNYLGLSR GDGRVRMVLG PWTHGERSVP HAGDVDFGPD AVLDGALAED YVAMRLAWFD HWLKGRPMPA RQQAAVRYFR MGGGSGARTA QGRLDHGGAW RSADHWPVPG TQPTAWHLHA DGRLAREPAP QPGVRSYRFD PACPVPTLGG SITSGEPLMF AGAYDQVTHE STFAARPPYG PLSERGDVLV FQTEPLQQDL EVTGTITIEL QVSSSAPDTD FTAKLIDQYP PSADHPQGYA MNITDGILRC RYRNSWEQPE LMTPGEVVAI TIEPMPTSNL FRKGHRIRLD ISSSNFPRFD VNPNTGAPEG SAGPMQVAVN SLHLGGAHVS RVVLPVVGRL VDRAV
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