Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5812 |
Symbol | |
ID | 5751433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6467321 |
End bp | 6467674 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641300944 |
Product | TonB family protein |
Protein accession | YP_001566825 |
Protein GI | 160901243 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.686482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.162663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGCA TGCGCTGCGC CATCCTTGCA TTGACCCTGG GCCTGCTGGC CGGCGGCCCG GCTGCGGCAG GCGTGGTGCA GCCTGTGCCC GACAGGCAGG CCAGCGAGAA CAAGATGCCG GCCTATCCCA AGGAAGCCAG GCGGCTGGAG CAGGAAGGCA AGGTGGTGCT GCGGGTTCTG GTGGGCGCCA GCGGAAAGGC ACTGGCCGTG GATGTGGCAG ACAGCAGCGG CTATCCTCTG CTCGACCAGG AGGCGCTGGA CGCCGTGCGG ACGTGGCGCT TTGTCCCCGG CACGCGCGAC GGCGTGCCGG ACAGCATGTG GACGCGCGTG CCCGTCACCT TCCTGCTGAA ATAG
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Protein sequence | MPRMRCAILA LTLGLLAGGP AAAGVVQPVP DRQASENKMP AYPKEARRLE QEGKVVLRVL VGASGKALAV DVADSSGYPL LDQEALDAVR TWRFVPGTRD GVPDSMWTRV PVTFLLK
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