| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5804 |
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| Symbol | |
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| ID | 5751425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6457155 |
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| End bp | 6461339 |
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| Gene Length | 4185 bp |
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| Protein Length | 1394 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300936 |
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| Product | cell surface receptor IPT/TIG domain-containing protein |
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| Protein accession | YP_001566817 |
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| Protein GI | 160901235 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.512223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.443028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGG CGGCTCCGGC CCATGCCGCA GTGACTTCGG GGATCATCGG CTTCGGGACC
GGCGCCGCGC CTGGCGCCTT CCTGGATGTG GCCTCGGACT ACAACGGGCT TCGCTTCACC
GGCCAGTGGT CCTATTTCGC TGCAGTGGAC CTGCAGGCAG GCACCCCGGG AATCATCACG
TCCGGCGACG CCATCACCTC CACCACCCTT GACGGCAACG CCATCATCAA GGCGGCCAAT
GGCACGGACC GCTTCAGCCT CGCACAGGTG CGCATCCATG CTTACGGCTC CATGACCCAG
TTCACACTCA CGGGCTATCG CGGCGGCAGC CCCGTGTCCG GTGCCATCGT GACGGTCACC
AAGACGTCTC CCATGACCCA GCAATTCGTC CCTATCGATC TGAGCGCGCT GGCTGATGTG
GACGAAGTAC GGGTATCCAA CAACGCCACG GTTGGCGAAG GCGGCAACTT CGCCTTCGAC
GATCTGGCCG TCGATCCCTT CCCCCCTGCC GCACCCACGG CGACGGCACT GTCGCCCACG
AGCGGCCTGG CCGCTGGCGG ATATCCGGTC ACCATCACCG GAGCCAACTT CACCAACGTG
ATCGGCAGCT CCATCGTGAC CGCCGTGAGC TTCGGCGGCA CGCCGGCGAC CAGCTTCACG
GTCAACAGCG CCACCCAGAT CACGGCCACG GCACCGGCAG GATCGGGCAC GGTGAACGTG
ACCGTCACGA CGGCAGGCGG CACCAGCGTC ACTGCCACAG CCAATCAGTT CACCTATCTG
CCCGCGCCCA CGGTGACATC CGTCTCGCCC AACTTTGGCC CGCAGGCAGG CGGCACCAGC
GTGACCATCA CCGGCACCGA CCTGTCCGGC GCCACCGCCG TGCTATTCGG CGGGACAACC
GCCACCAGCT ATGTTGTCAA CAGCGCCACC CAGATCACCG CCACCTCGCC TGCGGGCACA
GGCCCGGTCG ATGTGCGCGT CACAACGGCG GGCGGCACCA GCGCCATCAG CGGGGCCGAT
CAATTCAGCT ACCTGGCAAC GCCCACGATC ACCAGCATCT CGCCCACGGC GGGCCCTCAG
GCGGGCGGCA CGGCGGTCAC CATCACAGGC ACGAACTTCA TCGGCACCAC GGGCGTGAAC
TTCGGCGCCT CGGCAGCGAC CGGCTTCACG GTCAACAGCG CCACCAGCAT CACGGCCACG
GCGCCGCCCG GAACGGGCAC CGTGGACATC CGCGTCAGCA ACTCCGTCGG CACCAGTCCC
GCCGTTGCCG CTGACCAGTT CACCTATGTG GCGGCACCGT CGGTCACCTC CATCTCGCCC
ACGGCAGGCC CCACCGGCGG CGGCACCACG GTGACCATCA CCGGTACCGG CTTCGCCGCA
GCACCTGGCA CCGGCGCCGT GCGCTTCGGC GCCACGACCG CCACCTACAC CATCAACAGC
AACACCCAGA TCACCGCCAC CGCGCCCGCG GGCAGCGCTG GCACGGTCGA TGTGACGGTG
ACCACGGTGG GCGGCACCAG TGCCACCAGC GCAGCCGATC AGTTCACCTA TGTGCCCGCG
CCCACGGTGA CTTCCATCTC GCCCACCAGC GGCCCGACCA GTGGGGGCAC CACGGTGACC
ATCACCGGCA CCAACTTCTC CGGTGCCACG GCCGTGACTT TCGGCGGCAC GGCCGCCAGC
GGCTTCACGG TCAACAGCAA CACCCAGATC ACTGCCACCG CGCCTGCCCA GGCCGCGGGC
ACGATCGATG TGCGCGTGAC CACGGGGGGC GGCACCAGCG CCACCAGTGC GGCAGACCAG
TTCACCTATG TGTCCGCACC CACGGTGACT TCCGTCTCGC CCACGGCAGG GCCCACCGCA
GGAGGAACCT CGGTGGTCAT CACCGGCACC AACCTCTCCG GCGCCACGGC CGTGACCTTC
GGCGGCACGG CCGCCACGGG CTTCACGGTC AACAGCGCCA CGCAGATCAC GGCCACCGCG
CCTGCAGGGT CGCCGGGCAC GGTCGATGTG CGCGTCACAA CGACTGGCGG CACCAGCGCC
ACCGGCGCGG CAGACCAGTT CACCTATGTG TCCGCACCCA CGGTGACTTC CGTCTCGCCC
ACGGCAGGGC CCACCGCAGG AGGAACCTCG GTGGTCATCA CCGGCACCAA CCTCTCCGGC
GCCACGGCCG TGACCTTCGG CGCCACGGCC GCCACGGGCT TCACGGTCAA CGGCGCCACG
CAGATCACGG CCACCGCGCC TGCCGGCACG GGCACGGTAG ATGTGCGCAT CACCACCGCG
GGCGGTACAA GCGCCACCAG CGCGGCCGAC CAGTTCACCT ATGTGCCTGC GCCCACGGTG
ACCTCCATCT CGCCCACCAG CGGCCCACAA GCGGGCGGCA CCACGGTGAC CCTGACCGGC
ACCAACCTGT CCGGCGCCAC GGCCGTGACC TTCGGCGCCA CGGCCGCCAC GGGCTTCACG
GTCAACAGCG CCACGCAGAT CACGGCCACC GCGCCTGCCG GCACGGGCAC GGTAGACGTG
CGCATCACCA CCGTGGGCGG TACCAGCGCC ACCAGCGCGG CCGACCAGTT CACCTATGTG
CCCGCACCCA CGGTGACTTC GGTCTCGCCC GCAAGCGGTT CTTCGATTGG TGGCACCACG
GTCACCCTGA CCGGCACGAA CTTCACCGGC GCCACGGCCG TGACCTTCGG CGGCACGGCC
GCCACGGGCT TCACGGTCAA CAGCGCCACG CAGATCACGG CCACAGCGCC TGCGGGATCG
GCGGGCACGG TCGATGTGCG CGTCACAACG ACTGGCGGCA CCAGCGCCAC CGGCGCGGCA
GGCCAATTCA CCTATGTGGC CATCACGGTG ACGCCCGCGA CGCTGGCCGG CACGCCCAAG
GTAGGCGTCT CGTTCAACGA GACCCTGACC GCCAGCGGCG GCGCAACCCC CTACACCTTT
GCAATGGCCA GCGGCAGCAC GCTGCCCACA GGCCTGTCGC TGTCGCCCGC CGGGGTGATC
AGCGGCACGC CCACGGCGGC CGGAGCCTTC AGCTTCACGG TGCAGGCGAC CGACAACAGC
AGCATCAGCG GCCAGCGCAC CTACAGTGGC AGCGTGACGG CAGCCACGGT GGTGCTGACG
CCTGCAGCTT CCACGCTGCC GGCTGCCAGG CTGAACACGG CCTATGCAGG GCAGACCTTC
ACTGCCAGCG GAGGCACGGC GCCCTACACC TACGCCAGCA GCGGCACGCT GCCGACCGGA
ATGACGTTCA ACGCCAGCAC CGGTGTTCTG AGCGGCACGC CCACCGCGGC GGGAAGCTTC
ACCTTCACCA TCACGGCCAC GGACTCCTCC ACGGGCACGG GTGCTCCGTT CACCTCGGGC
AGCACCAGCT ACACCCTGGT GGTGAACTCC ACCAACGCCG ACCTCAGCGC CCTGGCACTG
AGCAGCGGCA CGCTCGCACC GGGCTTTGGT GCAGGCACCC TGGCCTACAC GGCCACCGTG
CCCAACAGCA GCAGCACCGT CACAGTGACG GCCACCGCAG CCGATGCGGG CGCCACGATC
CTGGTCAACG GCGCAGCGGC TTCCACCCCG GTGGCGCTGA ATGTGGGCAG CAATACCGTG
TCCATCGAAG TCACGGCGCA GGACGGCACG ACCAAGAAAA CCTATGTGGT GACGGTGACG
CGCGAGGCCA GGCAAAGCGC CTCGGGCTCG GGTGTGGATC TGGGCATTGC CAACAGCAGC
CCCACCTGCA CGCTGACTGC GGCCAACTTC ACCTCGCCTT CTGCCGTGGC CGGCTCGCTG
GGCCCGCTGC CGGCGGCCTT TGCCTACCCG CAGGCCGCCG TGGACTTCAC GGCCAAGCAG
TGCGCCCCCA GCAGCACGCT GACCGTGACC CTCACCTTCA CGTCCCCCGT GCCCGCCAAC
GCGCAGCTGA TGAAGTACGA CGCCACCGCA ACGCCCAAGT GGCAGCCCTT CACGCCCACC
ATCAGTGGCA ACCAGGTCAG CTACACCATC GTGGACGGCG GCCTGCGCGA TGACGACAAG
ACGGTCAACG GCGAGTTCGT GGACCCCGTG ATCCTGGCCG TGCCGGCTCC CCCATCGGCA
CAGAGCATTC CCACGCTGGA CCGCTGGGGC CTGCTGCTGC TGTCGCTGAT GGCGGGAGCA
GCCGGCTTCA TGGGCATGGC GCGCAGGCAG CGTACCGGAC GGTAA
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| Protein sequence | MALAAPAHAA VTSGIIGFGT GAAPGAFLDV ASDYNGLRFT GQWSYFAAVD LQAGTPGIIT
SGDAITSTTL DGNAIIKAAN GTDRFSLAQV RIHAYGSMTQ FTLTGYRGGS PVSGAIVTVT
KTSPMTQQFV PIDLSALADV DEVRVSNNAT VGEGGNFAFD DLAVDPFPPA APTATALSPT
SGLAAGGYPV TITGANFTNV IGSSIVTAVS FGGTPATSFT VNSATQITAT APAGSGTVNV
TVTTAGGTSV TATANQFTYL PAPTVTSVSP NFGPQAGGTS VTITGTDLSG ATAVLFGGTT
ATSYVVNSAT QITATSPAGT GPVDVRVTTA GGTSAISGAD QFSYLATPTI TSISPTAGPQ
AGGTAVTITG TNFIGTTGVN FGASAATGFT VNSATSITAT APPGTGTVDI RVSNSVGTSP
AVAADQFTYV AAPSVTSISP TAGPTGGGTT VTITGTGFAA APGTGAVRFG ATTATYTINS
NTQITATAPA GSAGTVDVTV TTVGGTSATS AADQFTYVPA PTVTSISPTS GPTSGGTTVT
ITGTNFSGAT AVTFGGTAAS GFTVNSNTQI TATAPAQAAG TIDVRVTTGG GTSATSAADQ
FTYVSAPTVT SVSPTAGPTA GGTSVVITGT NLSGATAVTF GGTAATGFTV NSATQITATA
PAGSPGTVDV RVTTTGGTSA TGAADQFTYV SAPTVTSVSP TAGPTAGGTS VVITGTNLSG
ATAVTFGATA ATGFTVNGAT QITATAPAGT GTVDVRITTA GGTSATSAAD QFTYVPAPTV
TSISPTSGPQ AGGTTVTLTG TNLSGATAVT FGATAATGFT VNSATQITAT APAGTGTVDV
RITTVGGTSA TSAADQFTYV PAPTVTSVSP ASGSSIGGTT VTLTGTNFTG ATAVTFGGTA
ATGFTVNSAT QITATAPAGS AGTVDVRVTT TGGTSATGAA GQFTYVAITV TPATLAGTPK
VGVSFNETLT ASGGATPYTF AMASGSTLPT GLSLSPAGVI SGTPTAAGAF SFTVQATDNS
SISGQRTYSG SVTAATVVLT PAASTLPAAR LNTAYAGQTF TASGGTAPYT YASSGTLPTG
MTFNASTGVL SGTPTAAGSF TFTITATDSS TGTGAPFTSG STSYTLVVNS TNADLSALAL
SSGTLAPGFG AGTLAYTATV PNSSSTVTVT ATAADAGATI LVNGAAASTP VALNVGSNTV
SIEVTAQDGT TKKTYVVTVT REARQSASGS GVDLGIANSS PTCTLTAANF TSPSAVAGSL
GPLPAAFAYP QAAVDFTAKQ CAPSSTLTVT LTFTSPVPAN AQLMKYDATA TPKWQPFTPT
ISGNQVSYTI VDGGLRDDDK TVNGEFVDPV ILAVPAPPSA QSIPTLDRWG LLLLSLMAGA
AGFMGMARRQ RTGR
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