Gene Daci_5783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5783 
Symbol 
ID5751404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6437439 
End bp6438389 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content71% 
IMG OID641300915 
Producthypothetical protein 
Protein accessionYP_001566796 
Protein GI160901214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.614473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00280675 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCATGA ACGGAAAGAC AAGCTACCTG GCGCTGCTGG CCGTGGGCGG GCTGATCCTG 
AGCCTGTCCG GCGTGGCCGT GGCTTTCAGC AGCATGGGCA CCAGCGCCAT GGGCTTTTAC
CGCATGCTGC TGGGCGGCCT GGGGCTGGCC GGCTTTGCCC TGTGGCGCGG CCTGCGCTGG
CGCATGACGC GCCAGGCCCT GCTGTACGCC TGCCTGGCCG GCGCCGCGCT GGCGCTGGAC
CTGTACTGGT GGCACAAGAG CATACGGATG GTGGGGCCGG GCCTGGGCGC CATCCTGACC
AACTGCCAGT CGTTCTTTCT GGCGGGGCTG GCCTGGGCGG TGTTCCGCGA GCGGATCACG
GTCGTCTACT TCGTGGCGCT GGTGCTGGCG GCCACCGGTA TCCTCATGGT GTCGGGTGCG
GGCCTGCCCG TGGCCTCAGG CCCGGATTCG GCGTCCGAGC ACTGGCTGGG CGTGGCCCTG
GGCCTGGCCT CGGCGGCGGC CTATGCGCTG TGCGTGGTCT TCATCAAGAA GGGGCAGACC
CCGCCGCACG CCACGCACCC GGCCGTCAAC ATGGCCGTGC TGTGCGCCGC CGCCGCGCCC
TGCCTGCTGG CAGCCGCGTG GCTGGAGGGC GAATCGCTGG CCATTGCCAG TGCGGCCGAT
TTCGGCACGC TGCTGCTGTA CGGCCTGCTG GTGCAGGGCG TGGCCTGGCT CATGGTGAGC
ACGGCCGTGC CGCATGTGAA GGCCTCGCTG GCCGGCCTCA TCCTGCTGGC CGAGCCCATA
GGCACCTATG CCATCGACGT GCTGTTCTTC ACCGCCCGGC CCACGCCGAT GGCGCTGGCC
GGCATGGCGC TGACGCTGGC GGCCATCTAT GCGGGATCGA CCTATGGCGG AGCGCCCTCC
GGCGGAGCGC CCGCAAGGCG CATGGCGAAG GCGCAAGGCT CCGGCCACTG A
 
Protein sequence
MRMNGKTSYL ALLAVGGLIL SLSGVAVAFS SMGTSAMGFY RMLLGGLGLA GFALWRGLRW 
RMTRQALLYA CLAGAALALD LYWWHKSIRM VGPGLGAILT NCQSFFLAGL AWAVFRERIT
VVYFVALVLA ATGILMVSGA GLPVASGPDS ASEHWLGVAL GLASAAAYAL CVVFIKKGQT
PPHATHPAVN MAVLCAAAAP CLLAAAWLEG ESLAIASAAD FGTLLLYGLL VQGVAWLMVS
TAVPHVKASL AGLILLAEPI GTYAIDVLFF TARPTPMALA GMALTLAAIY AGSTYGGAPS
GGAPARRMAK AQGSGH