Gene Daci_5776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5776 
Symbol 
ID5751397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6432358 
End bp6433347 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content72% 
IMG OID641300908 
Producthypothetical protein 
Protein accessionYP_001566789 
Protein GI160901207 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00138477 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCGCA CCCCGTCTGC GCTGCGCGCA CTGCTGCTTC CCCTGTTCTC CGCCCTGGCC 
CTGCACGCGC CTGCGGCCCT GGCCTCGGCC GACAGCTTTC CGAACAAGCC GGTGCGCATC
ATCGTGCCCG TGGCGCCCGG GGGCAGCGCC GACAAGCTCA CGCGCACGCT GGCCGACAAG
CTGGCCGCGC TGTGGGGCCA GTCGGTGGTG GTGGAGAACG TGGCCGGGGC CAGCGGCACC
ATCGGCGCGG CCAAGGTGGC CAAGGCCGCG CCCGACGGCT ACACCCTGCT GCAGCAGGGC
GAGGGCCTCA CGCTCAACGG CCTGCTGTTC GCCCAGTTGC CCTACGACAC GCAAAAGGCC
TTCACGCCCA TCATCAAGGC CGTGGTCAAT CCGCAGGTGC TGGTGGTCAA CCCCGCCACG
GGCCTGAACA CGCTGGGCGA CTACCTGGCC CGCGCCAAGG CCAAGCCGCA AAGCATCAGC
CTGGGCCTGC CCGGCAATGG CGGCATTGCC CATGTGGCGC ATGAAATCCT CACGCAGGAG
ACGGGCGCCA AGGTCAACTA CATCCCCTAC CCGGGCGGTG GCCCCGCCTC GCTGGACGTG
CTGGGCGGCC ATACCGACGC CACGCTGATC ACGCTGGCCG CCGTGACCGA GTACGTGCGC
GCCGGCAAGC TGCGCGCCCT GGCCGTGACC ACGCCCTACC GCTCCGACGC CCTGCCCCAG
GTACCCACCA TGGCCGAGGC CGGCGTGCCC GGCTTCTCGG TGGAAAGCTG GCAGGGCTAC
TTCGCGCCGG CCGGCACGCC CGCGCCCATC GTCGCCAAGA TCAACCGCGA CCTGCAGACC
GTGCTGCAGG CCCCCGATGT GCGCGCGCAG CTGGAGCACA TGGGCTTCAA GGTGGCGGGC
GGCTCACCGG CCGACCTGGG CCAGAGCCTG CAAAGCGAGC GCCCGCGCTA CGCCCGGGCG
ATCCAGTCGG CGGGGCTGTC GCTGCGCTGA
 
Protein sequence
MIRTPSALRA LLLPLFSALA LHAPAALASA DSFPNKPVRI IVPVAPGGSA DKLTRTLADK 
LAALWGQSVV VENVAGASGT IGAAKVAKAA PDGYTLLQQG EGLTLNGLLF AQLPYDTQKA
FTPIIKAVVN PQVLVVNPAT GLNTLGDYLA RAKAKPQSIS LGLPGNGGIA HVAHEILTQE
TGAKVNYIPY PGGGPASLDV LGGHTDATLI TLAAVTEYVR AGKLRALAVT TPYRSDALPQ
VPTMAEAGVP GFSVESWQGY FAPAGTPAPI VAKINRDLQT VLQAPDVRAQ LEHMGFKVAG
GSPADLGQSL QSERPRYARA IQSAGLSLR