Gene Daci_5755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5755 
Symbol 
ID5751376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6409724 
End bp6410374 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID641300887 
ProductYheO domain-containing protein 
Protein accessionYP_001566768 
Protein GI160901186 
COG category[S] Function unknown 
COG ID[COG2964] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00241536 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000540056 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAATA TGACCCAACG AACCCCTGAA CAGCGCCAGC TTCTGGACCA GCTGGCCCAG 
ATCGCCGAAG GCCTGGGCCA GACCTTTGCC CCGTTCTGCG AGGTGGTGGT GCATGACCTG
CTCGACCCCT CCCACGCGGT GCTGGCCATC CACAACAACC TGTCGGGCCG CGAAGTGGGC
CAGGGCGCGA CGGAGCTGGG CCTGGCCCGC ATCCTCGACC CCGGCTACGA GCAGGTCATC
GCCAACTATC CCAACCAGTT CGCCGATGGC CGCCAGGCCA AGAGCACGTC CATCGGCATC
CGCGACTCCG AGGGCCGCTA CATCGCCGCC CTGTGCATGA ATGTGGACCT GACGATGTTC
CAGGGCTTCC AGGGCATGCT CAACCGCTTT GCCGCCGTCA GCGGCGACAC CCCCGCGCGC
GAAATGCTGG ACCCCACGGG CGCCGGCGCA GGCGCCGACA CGGTGCGTGC CCGCATCGAC
CAGTTCGCGG CCCGCCTGGC GACCACGCCG CGCGCCCTCA AGCCCGAGGA GCGCCGCGCC
CTGGTCCGCG AGCTCAAGGG CGCCGGCCTG CTCGATGTGC GCCGCTCCAT GGAGACCATT
GCCGCCCACC TGGGCGTGTC GCGCGCCACG GTCTACAGCT ACGCCAAATA G
 
Protein sequence
MSNMTQRTPE QRQLLDQLAQ IAEGLGQTFA PFCEVVVHDL LDPSHAVLAI HNNLSGREVG 
QGATELGLAR ILDPGYEQVI ANYPNQFADG RQAKSTSIGI RDSEGRYIAA LCMNVDLTMF
QGFQGMLNRF AAVSGDTPAR EMLDPTGAGA GADTVRARID QFAARLATTP RALKPEERRA
LVRELKGAGL LDVRRSMETI AAHLGVSRAT VYSYAK