Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5752 |
Symbol | |
ID | 5751373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6405526 |
End bp | 6407766 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641300884 |
Product | TonB-dependent receptor |
Protein accession | YP_001566765 |
Protein GI | 160901183 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0523831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000000276247 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTTCG CTTCTTCGGC CGCCGATTCC TCCGGCCTTC TCTCTGTTCT CCCTCTTGTC TCCAGCCTGC GGCCCGCAGC GGCCGCCGTC CTGCTGGCCA GCTGCGCTGC AGCGGCCGGC GCCGCGCAGG AGCCGGCTTC GGGCCGCTCC GCGGACTCCG CCGACGATGC GCTGGATGCC GTCTTCGTGA CCGCCACCGC GCGGCCCGAG GCGCGCAGCC GCATCGCGGG CACCACGCAG ACCATCGACC GCGAGGCCAT AGAGCGCTCC AGCGCGCGCT CGGTCACCGA CCTGCTGGCC GAGAACGCCG TGGGCTTTCT CAGCGAATGG ACGGCGGCCC AGACCTCGAT GAACCTGCGC GGCGCCTCCA CCGACGGCCA GGGGCGTGAC TTCCGCAGCC AGGTGCTGGT GCTGGTCAAC GGCCGGCGCG CGGGCACGGC CAACCTGTCC AAGCTCAGCC CCTCGGATGT GGAGCGCATC GAGATCGTGC GCGGCCCGTC CTCGGTGATC TACGGCAGCC AGGCCATGGG CGGGGTGGTC AACATCATCA TGAAGACGGG GGCGACGGCG CCCGGCACGC GCGCCCAGGT CCAGGCCGGT TCATGGGACC TGTGGCGCAC CGATGCGCAG ACGGCCGGCG CCAATGACCG CTTCGACTGG TACTTCGGCG TGAGCGCAGG CGGGCGCGGC GACTACGAGT CGGGCGACGG CGGCACGCGC ATGGAGAACA CGGGCTGGAA GCGGCGCGGC GCCAGCGGCG CCCTGGGCTG GCAGCTGCAC GAGCTGCACC GCGTGGAGCT GCAGCTGCGC ACGGACGGCA TCTACAACGC GGGCTTTCGC GGATCGGGCG CCAACATCTA CAGCCGAGAC AACCGCAGCA ACCGCTCGCT GGACCTGACC TACGAGGGCG CGCTGCCCGG CCAGCGCCTG AGCTGGACGA CCCACCTCTA CAGCCTGGTC GATACCGATG AGTTCAACTG GGCATCGCCC GTGATCCGCT CGGGCAACAG CGCCGTGCCC GGCACGGCGC GCGACTACAA CCACCGCCAG CTGGACGCCA CGGGCCTGCG CTTTCAGCCG CGCCTGCGTG TCAGCCAGAC CAATGACCTG CTGATGGGCT TTGACTGGGA GCGCAGCAAG CTGCGCTCCG ACCGCCTGCG CGTGGCCATG CCGGGCGGCC CGGCGGGCCA GGTCGCGCCC TACGATAACA ACCAGACCGA GCAGGTGCAC GCGCTGTACT TCGAGGACGC GCAGACCCTG TTCGACGACC GCCTGACCCT GCGTGCCGGC CTGCGCAAGA CCTGGGGCAC GACGCGTTTC GACGAGACGC CCAACCTGGC CCTGGCCCAG GCCAGCACGC GCGACTACGA CAACCACACC TGGTCGGCCG GCGCCACCTG GAAGGCCACG GACCGGCTCA CGCTGCGCGC TGCGGCCTCC ACGGGGTTCC GCGCGCCCAC GGCCACGGAG CTGGCCTCGG ACTTCACGGC CGTCGGCGGT GGCCGCACCT TCGGCAACCC CAACCTCAAG CCCGAGACCA GCCGCCAGAT CGAGGTCGGC GCCGCGCTGC AGCAGCCCGG CTGGCGCGTG GATGCGGCCC TGTTCCAGAA CACCATCAGC GACCGCATCA TCACCGTCTC GCGCGGGGCG ACGACCAACA CCTCGGACTA CGCCAACAAC GCGGCCGACA TCGTGGCGCG CGGCCTGGAA ATGCAGGCCG ACATGGACCT GGCGCGGGCG CTGAACCTGA CGGGCCACCA GCTCAAGGCC TGGGCTGGCG GCTACTACCA CTTCAGCATG CGGGACAAGG GATCGCCAGC CTCGGCCAAC ACCGACAAGG TGCAGCGCAT GTACCGCTAC GAGGCCTCGG CCGGCGTGCG CTACGGGCGC GGCAGCGGGC GCCTGCAGGG CGACTGGAGC CTGCAGCTGT CCACGCTGCT GCGCGGTCCC ATGTGGTACG ACACGGAAGA GGCGCTGCTC ATCCCGCAGG GCGAGCCCAG CAGCACCTTC ATCCACCGCA AGGGCGCCTT CACCATCTGG AACCTGCGTG CCGACTACCG CGTGTCGCGC GGCGTCAAGC TGTTCGCAGC CGTCAACAAC CTGTTCGACC TGAACCGCCA TCCCATCTTC ATCGCACTGG ACCGCGCGCC CTGCATCGCC AACCCGGCGT ACCAGAACGG CGGCTGCGGA ACGTCGATGG CGGGCCGCGA ACTCATGGTC GGCCTGCAAG CAGAGTTTTG A
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Protein sequence | MRFASSAADS SGLLSVLPLV SSLRPAAAAV LLASCAAAAG AAQEPASGRS ADSADDALDA VFVTATARPE ARSRIAGTTQ TIDREAIERS SARSVTDLLA ENAVGFLSEW TAAQTSMNLR GASTDGQGRD FRSQVLVLVN GRRAGTANLS KLSPSDVERI EIVRGPSSVI YGSQAMGGVV NIIMKTGATA PGTRAQVQAG SWDLWRTDAQ TAGANDRFDW YFGVSAGGRG DYESGDGGTR MENTGWKRRG ASGALGWQLH ELHRVELQLR TDGIYNAGFR GSGANIYSRD NRSNRSLDLT YEGALPGQRL SWTTHLYSLV DTDEFNWASP VIRSGNSAVP GTARDYNHRQ LDATGLRFQP RLRVSQTNDL LMGFDWERSK LRSDRLRVAM PGGPAGQVAP YDNNQTEQVH ALYFEDAQTL FDDRLTLRAG LRKTWGTTRF DETPNLALAQ ASTRDYDNHT WSAGATWKAT DRLTLRAAAS TGFRAPTATE LASDFTAVGG GRTFGNPNLK PETSRQIEVG AALQQPGWRV DAALFQNTIS DRIITVSRGA TTNTSDYANN AADIVARGLE MQADMDLARA LNLTGHQLKA WAGGYYHFSM RDKGSPASAN TDKVQRMYRY EASAGVRYGR GSGRLQGDWS LQLSTLLRGP MWYDTEEALL IPQGEPSSTF IHRKGAFTIW NLRADYRVSR GVKLFAAVNN LFDLNRHPIF IALDRAPCIA NPAYQNGGCG TSMAGRELMV GLQAEF
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