Gene Daci_5751 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5751 
Symbol 
ID5751372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6404574 
End bp6405515 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content75% 
IMG OID641300883 
Productperiplasmic binding protein 
Protein accessionYP_001566764 
Protein GI160901182 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.48327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000101276 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGCAAT CCAGCACCAC GCGCCGCCAG TTGCTGCGCC AGGGCGCGGC GGCGGCCCTG 
GGCTGCGGCC TGCCCGCGGC CTGGGCCGAC ACCGTCGCTG CAGGCGGTCC GGTGGTGCTG
CAGGATGCGC TGGGCCGGCG CGTGGAGATT GCTGCGCCGC CGCAGCGCAT CGTCTCCATC
TTTGCCTCCA ATACCGAGCT GGTGGCCGCG CTGGGCCTGC TGGACCGCGT GGTGGGCGTG
GAGGATTTCA CGCGCTTTCC ACCGGGCGTG GAGCGCATTC CCAAGGTGGG CGGGCGGCTG
GGGTTCTCGG TGGACGCCGT GGTGGCGCGC CAGCCGGACC TGGTCATCGT CACGCCCGCG
CGCCAGGCGG CGCACCAGCT GGTCGATCCC ATGGAGCGCA TCGGCGTGCC GGTGATGGTG
CTGCTCAGCC GCTCGCTGGC CGAGGTGATG GACAACCTGC GCCTGGTGGC CCGCGCCACG
GGCGTGCAGG CGCGCGGCCA GGCGCTGGCC CTGGCGCAGG AGGCGCGGCT GCTGCGCGTG
GACCGGCAGG TGGCCGGCCA GCCCCGGCCG CGCGCCCTCA TGGTCACGGG CCGGCTGGGC
AACGGCATGC TGCTGGCGGC CCGGCCGGGC ACCTATACGG GAGAGGCCAT GGTGCGCGCG
GGCGCCGCGT TCGCGCTGGA CGGCCTGGGC ACGGTGCCCC AGGTCTCGCC CGAGGCCGTG
CTGGCCGCCG ACCCCGATGT GCTGCTGTTC GCGGGCACCC AGGAGGCCAT GCAGGACCTG
AGCGGCCAGC GCGGCTGGCG CGACCTGCGT GCCGTGCGCG GGGGCCGGGC CACCACGGTG
GCGCGTGCCG AGTTCCTGAT TCCCGGGCCG CGCACCTTCG GCGGCGTGGA AAAGCTCTCG
CGCTGGCTGC ACCCTGTGGC CTGGGCCGGG GAGGCCGCAT GA
 
Protein sequence
MRQSSTTRRQ LLRQGAAAAL GCGLPAAWAD TVAAGGPVVL QDALGRRVEI AAPPQRIVSI 
FASNTELVAA LGLLDRVVGV EDFTRFPPGV ERIPKVGGRL GFSVDAVVAR QPDLVIVTPA
RQAAHQLVDP MERIGVPVMV LLSRSLAEVM DNLRLVARAT GVQARGQALA LAQEARLLRV
DRQVAGQPRP RALMVTGRLG NGMLLAARPG TYTGEAMVRA GAAFALDGLG TVPQVSPEAV
LAADPDVLLF AGTQEAMQDL SGQRGWRDLR AVRGGRATTV ARAEFLIPGP RTFGGVEKLS
RWLHPVAWAG EAA