| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5747 |
|---|
| Symbol | |
|---|
| ID | 5751368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 6400687 |
|---|
| End bp | 6401736 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641300879 |
|---|
| Product | cobalamin biosynthesis protein CobW |
|---|
| Protein accession | YP_001566760 |
|---|
| Protein GI | 160901178 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | [TIGR02475] cobalamin biosynthesis protein CobW |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0000000222169 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACCG CCAAGATTCC CGCCACCATC GTCACCGGCT TCCTGGGCAG CGGCAAGACC
ACGCTGCTGC GCCACATCCT GGACAACGCC GATGGCCGGC GCATCGCGGT CATCGTCAAC
GAGTTCGGCG AGCTGGGCAT CGACGGCGAG ATCCTCAAGG GCTGCGGCAT CGGCTGCGAC
GACGAGGGCA ACGAGCGCGA AGGCGCGCTG TACGAGCTGG CCAACGGCTG CATGTGCTGC
ACGGTGCAGG AAGAGTTCTT CCCCGTGATG CGCGCGCTGG CCGAGCGCCG CGACCAGATC
GACGCCGTGA TCATCGAGAC CTCGGGCCTG GCCCTGCCCA AGCCCCTGGT CCAGGCCTTC
CAGTGGCCCG AGATCGCCAA CGTGTTCACC GTGGACGCGG TGGTCACCGT GGTGGACACG
CCAGCGGCCG CCAGCGGCCA GTTCGCCGCC AATCCCCAGG CCGTGGACGA GCTGCGCCGC
GCCGACCCCA ACCTGGACCA CGAATCGCCG CTGCACGAAC TCTTCGAGGA CCAGCTGGGC
GCGGCCGACC TGGTGGTGCT CAACAAGACC GACCTGGCCG ATGCCGAGGC CCTGGCGCGC
GTGACCGCCC TGGTGCGCGA GGAGCTGCCG CCCGAGGTCA AGATCGTGCA ATCGTCCCAG
GGCCGCCTGC CGCTGGACGT GGTGCTGGGC CTGGCCAAGG CGGCCGAGAC CACCATCGAC
CAGCGCGTGA GCCACCATGA CCACGACGAG GACCATGACC ACGACGACTT CGACTCCTAC
GTGATCGACC TGCCCGCCGT GGACCGCGAC CGCCTGCTGG CCGCGCTGGA GACGCTGGTG
GAGCAGCACA GCATCCTGCG TGTCAAGGGC TTTGCCGACA TCCCGGGCAA GCCCATGCGC
TGGCTGCTGC AGGGCGTGGG CCGCCGCTTC GACCACCATT TCGACCGCGC CTGGCGCGAG
GGCGAGCAGC GCGGTACGCG CCTGGTGTTC ATCGGGCAAG ACCTTGACGA AGCAGCGCTG
CGCAAGGGCC TGGAGAATGT GGCCGCCTGA
|
|---|
| Protein sequence | MQTAKIPATI VTGFLGSGKT TLLRHILDNA DGRRIAVIVN EFGELGIDGE ILKGCGIGCD
DEGNEREGAL YELANGCMCC TVQEEFFPVM RALAERRDQI DAVIIETSGL ALPKPLVQAF
QWPEIANVFT VDAVVTVVDT PAAASGQFAA NPQAVDELRR ADPNLDHESP LHELFEDQLG
AADLVVLNKT DLADAEALAR VTALVREELP PEVKIVQSSQ GRLPLDVVLG LAKAAETTID
QRVSHHDHDE DHDHDDFDSY VIDLPAVDRD RLLAALETLV EQHSILRVKG FADIPGKPMR
WLLQGVGRRF DHHFDRAWRE GEQRGTRLVF IGQDLDEAAL RKGLENVAA
|
|---|
| |