| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5732 |
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| Symbol | |
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| ID | 5751353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6379933 |
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| End bp | 6381144 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641300864 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001566745 |
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| Protein GI | 160901163 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.588725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCTT CCTGCTCCCA TCCCTTTTGT CCGAGCTCTG AATCCATGCA ACGCCGTCAA
CTTGTTTCCC TGCTTCCCCG TGCTGCATCC ATCGCAGCGG TTCCCGCGCT GGCGCCGGCC
TTCGTGCGCA ATGCCTTCGC CGATGAGGCA GGCCTGTCCG CCAAGACCAT CACCATCGGC
TGCTCGGCCG CCATGAGCGG CCCGCTGGCC GGGTTCGGCA CCGACATCAA GCTGGGCACG
GAAGCGGCCA TGGCGCAGAT CAACGCGCGT GGCGGCATCC AGGGCCGCAC GCTGCAGTTG
CAGATGGTTG ACGACGGCTA CGTGCCCCAG CGCACGGCCG ACAACGTGCG GCAGATGCTC
TCCAAGGGCA CGGCCTTTGC CCTGCTGTCC TGCGTGGGCA CGCCCAACAA CGCCGCCGTC
ATCCCGCTGA TCGAGGAAGC CGGCGTTCCC TATGTGGCGC CCTTCACGGG CGCCTCGTCG
CTGCGCAAGG CATCGCGCAA CGTCTTCCAT GTGCGCGCCA GCTACACCAC CGAGGTCCGC
CGCCTGGTCC AGCGCCTTGC GGGCATGGGG CTCAAGGGCA TTGGCATCGT CTACCTGGAC
AACGCCTACG GCCGCGAAAT GCTGGAGGAC GCCACGCACG CCCTGGAGGC CGAGAAGATG
GCTCCCGCCG TGCAGGCGGC CATCGCCACC GATGGCAAGA ATCTGGCCGA TGTGTTGAAC
AAAGTGGAAG CGGCCCACCC CTCGGCCGTG CTGCTGGCCA CGGCTGGCAC GGTGTCGGTC
GATCTGGTGC GCGGCCTGCG CAAGAGCGCG CCCGGCGTGC TGCTCACCGG CCTGAGCGTG
ACCCTGCCCA ACGACAGCCT CAAGCCGCTG GGCGAGGACG CCCGGGGCAT TGCCCTGACC
ATGGTCGTTC CCGCGCCGCA CCAGGCCAAG CTGCAGGTGG TGCGCGACTA CCAGGCCGCC
ATGCGCGCCC ACGGGCAGCA GGAGTTCTCG CTGGGCACGC TGGAAGCCTA TGTGAACACA
CGCGTGCTGG CCGAAGGCCT GGAACGCGCA GGCCGCGACC CCAGCCAGGC CAGGCTGCGC
TCGGCGCTGG CCGGCATCCG CAACTGGGAC ATGGGCGGCT TCGTCATCGA CTACAGCGGC
CAGGCGCCCC ATGTCGGCTC CAGCTTCATC GACCTGGGCG TGCTGGGCAA TGCGGGGCGC
TTCATCGGTT GA
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| Protein sequence | MAPSCSHPFC PSSESMQRRQ LVSLLPRAAS IAAVPALAPA FVRNAFADEA GLSAKTITIG
CSAAMSGPLA GFGTDIKLGT EAAMAQINAR GGIQGRTLQL QMVDDGYVPQ RTADNVRQML
SKGTAFALLS CVGTPNNAAV IPLIEEAGVP YVAPFTGASS LRKASRNVFH VRASYTTEVR
RLVQRLAGMG LKGIGIVYLD NAYGREMLED ATHALEAEKM APAVQAAIAT DGKNLADVLN
KVEAAHPSAV LLATAGTVSV DLVRGLRKSA PGVLLTGLSV TLPNDSLKPL GEDARGIALT
MVVPAPHQAK LQVVRDYQAA MRAHGQQEFS LGTLEAYVNT RVLAEGLERA GRDPSQARLR
SALAGIRNWD MGGFVIDYSG QAPHVGSSFI DLGVLGNAGR FIG
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