Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5727 |
Symbol | |
ID | 5751347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6374789 |
End bp | 6376384 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641300859 |
Product | allophanate hydrolase subunit 2 |
Protein accession | YP_001566740 |
Protein GI | 160901158 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 [COG2049] Allophanate hydrolase subunit 1 |
TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.506367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.818149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTTTTC TACCCGTCAA CCGGCAGGCC CTGATGGTGG AGCTGGCCGA TCTGGATGAA ACCCTGGCCC TGCTGGGCTC GCTGCAGCGC GAGCCCATCG ATGGCGTGCA GGAGCTGGTG CCGGCCGCGC GCACCGTGCT CGTGCAGTTC GCTCCCGCCA GGCTGGGCGT GGCCGAGCTG GTGCGCCGCA TTGCCGCGCG CGACCTGGGC CAGCGGGCCG AGCGCAGCAA TGTGCTGGTC GAGATTCCCG TGCACTACGA CGGCGAGGAC CTGGCCGATG TGGCGCAGCT GCTGGGCATC ACGCCCGAGG AAGTCGTGCG CCGCCACACG GGCAGCGAGT ACGCCGTGGC CTTCACGGGC TTCGCGCCCG GCTTTGCCTA CCTCAGCGGG GGCGATCCGA TCTTCAACGT GCCGCGCCGC ACCACGCCGC GCACGCGCGT GCCGGCCGGC TCCGTGGCGC TGGGCGGCAC GTTCAGCGCC GTCTATCCCC AGGCCAGCCC GGGCGGCTGG CAACTGATAG GCCGCACCTC GGCCCGCATG TGGGACCTGG CGCGCGAGCT GCCTGCGCTG CTGCAGCCCG GCTACCGCGT GCGCTTTGCC GATGCGGCCG GCATGGCCCA GGTGGATGAG GCGCCCGCGC CCGCCGTGGC ACAGGCCGCG CCGCATGAAG GCAACGCGCT GCGCGTCAAG GCCACGGGCC TGATGACGCT GTTCCAGGAC CGGGGCCGCC TGGGCCAGGC CGGGCAGGGC GTCTCGGCCT CGGGCGCCAT GGACCAGGCA GCCTTCAAGG CCGCCAACCG CCTGGTCGGC AATGCCAGCG ACCTGGCCGT GCTGGAGACC GTGGGCGGTG GCCTGTCGCT GCAAAGCCAG GGCGAGACCG TGGTCGCCAT CACGGGCGCC GATGCGCCCC TGACCGTGAC CACCGGATCC GGCCAGCGCT GGAGCGTGCC GCGCTACCAG GCCGTGGCCC TGGCCGATGG CGACCAGCTG ACCGTGGGCC AGCCCGTGGC CGGCGCGCGC TGCTATGTGG CCGTGCGCGG CGGCTTCGCC GTCACGCCCG TGCTGGGCAG CGCCTGCACC GACACCCTGG CGAATGTCGG CCCAGCCGCC CTGGCCGTGG GCCAGGTCCT GCCCGTTCGG CCTGCGGACC GCAAGGCCGT GGCCGCACCC GAGCTGCCGC CCGAATCCCT GCCCACCACC GGGCAGGACG TGGTGCTGGA CGTGGAGCTG GGCCCGCGCA CCGACTGGTT CACGCCCGAG GCCGTGGCCC TGCTGGCCGC GCAGCGCTGG CAGGTCACGC CGCAGTCCAA CCGCGTGGGC CTGCGCGTGG CCGGCGAGCA GCCCCTGGCG CGCGCCGTGG CCGGCGAGCT GCCCAGCGAA GGCACGCCGC TGGGCGCCAT CCAGGTGCCC CCCAGCGGCC AGCCCGTGCT GTTCCTGGCC GACCATCCGC TGACGGGCGG CTATCCCGTC ATCGGCTGCG TGGCGCCGCA CCACCTGGAT CTGGCCGGCC AGATTCCCGT GGGCGCCTGG ATCCGCTTCA ACCCCATCCG CGCCTTCGAG GAATACACCC CCGGCGCGCA AGGCTCCAAG AACTGA
|
Protein sequence | MRFLPVNRQA LMVELADLDE TLALLGSLQR EPIDGVQELV PAARTVLVQF APARLGVAEL VRRIAARDLG QRAERSNVLV EIPVHYDGED LADVAQLLGI TPEEVVRRHT GSEYAVAFTG FAPGFAYLSG GDPIFNVPRR TTPRTRVPAG SVALGGTFSA VYPQASPGGW QLIGRTSARM WDLARELPAL LQPGYRVRFA DAAGMAQVDE APAPAVAQAA PHEGNALRVK ATGLMTLFQD RGRLGQAGQG VSASGAMDQA AFKAANRLVG NASDLAVLET VGGGLSLQSQ GETVVAITGA DAPLTVTTGS GQRWSVPRYQ AVALADGDQL TVGQPVAGAR CYVAVRGGFA VTPVLGSACT DTLANVGPAA LAVGQVLPVR PADRKAVAAP ELPPESLPTT GQDVVLDVEL GPRTDWFTPE AVALLAAQRW QVTPQSNRVG LRVAGEQPLA RAVAGELPSE GTPLGAIQVP PSGQPVLFLA DHPLTGGYPV IGCVAPHHLD LAGQIPVGAW IRFNPIRAFE EYTPGAQGSK N
|
| |