Gene Daci_5716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5716 
Symbol 
ID5751336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6355821 
End bp6356354 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID641300848 
Productacetyltransferase 
Protein accessionYP_001566729 
Protein GI160901147 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0623138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTGGA GCGACACCAC CATCACCTCA CAGCGCCTGG CGCTGCGCCC CTTCACCGCC 
GCCGATGCCG ATGAGGCCTT TGCCTGCATC ACGCCCACGC TGACGCGCTA CCTGTCGTTC
GAGCCGGCGT CGACGCCTGC CGAGTTCGAG GCTGTCTGGC GCGGATGGCT GCAGGAGATC
GCGGCCGGCA CGGACTTCAA CTTCACGCTG CGCGAGCGCA CGTCAGGCCG ATTCACCGGC
CTGCTGGGCC TGCACCGCGC GCGCGACGCC GAGCCCGAAC TCGGGATCTG GATACGCGAG
GACGTGCATG GCCAGGGCTA CGGCCGCGAA GCCGTGGCCG CGCTGGCAGC ATGGACCCGA
GCGACCTTTG CGCCACAGTC CTTGCGCTAT CCGGTGGCCG AGCCCAATAC CGCCAGCCGG
CGCATTGCCC AGAGGCTGGG TGGCATGGAG GTTGAGCGCC AGAGCCTTTC AAAGTACGTG
CTCGTCGTCT ACCGCATACC AGGGGTCGCC ACGTCGGGCG TTGCCGCCCC ATGA
 
Protein sequence
MSWSDTTITS QRLALRPFTA ADADEAFACI TPTLTRYLSF EPASTPAEFE AVWRGWLQEI 
AAGTDFNFTL RERTSGRFTG LLGLHRARDA EPELGIWIRE DVHGQGYGRE AVAALAAWTR
ATFAPQSLRY PVAEPNTASR RIAQRLGGME VERQSLSKYV LVVYRIPGVA TSGVAAP