Gene Daci_5714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5714 
Symbol 
ID5751334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6353296 
End bp6353757 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content70% 
IMG OID641300846 
ProductMarR family transcriptional regulator 
Protein accessionYP_001566727 
Protein GI160901145 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00966957 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCTTTG CCTCTGCCCC TCCCCGCGCC CGCCTCGGCT TTCTCATGGT CACCCTGGTA 
CGCCAGTGGC GCCGCCAGGT CGAGGAGCAA CTGCTGGCCG ACGGCCTGAC CGATGCCACC
TGGGCGCCGC TGATCCACCT GCGCGCCTGG GGCGACGGCG TCACGCAAAA GGAACTTGCC
GAGCGTGTGG GCCTGGACGG CTCCAGCCTG GTGCGCCTGC TCGACATTCT GGAAGGCCAC
GGCTGGGTGG AACGCCGCGC CGACCCCGGT GACCGGCGCA GCAAGCGCAT CTTCCTGACC
GATGAAGGCA ACGGCGCCGT GGACCGCGTG CGCGCCACCA TGCTGCAGGC CGAGCTGGCC
ATGCTGCAGG ACCTGGACGA TGCCGAGGTC GAGGCCATGC TGGCCGGCAT GGCCAAGATC
CAGGCGCGCA TGGCCGCGCT GCGCACGGAA GGCGCGCCAT GA
 
Protein sequence
MSFASAPPRA RLGFLMVTLV RQWRRQVEEQ LLADGLTDAT WAPLIHLRAW GDGVTQKELA 
ERVGLDGSSL VRLLDILEGH GWVERRADPG DRRSKRIFLT DEGNGAVDRV RATMLQAELA
MLQDLDDAEV EAMLAGMAKI QARMAALRTE GAP