Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5712 |
Symbol | |
ID | 5751332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6351017 |
End bp | 6351922 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641300844 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001566725 |
Protein GI | 160901143 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0283707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCACC TCACCCTGCG CCAACTTGAA ATCTTCTGCG CCGTCGCCCA GGCGGGCTCC ACCGTGGCCG CGGCCGACGC CGTGGCCCTG TCGCAGTCGG CCACCAGCGC CGCGCTGCAG CAGCTGGAGC AGGCCATGGG CGCCCAGCTG TTCGAGCGCG TGGGCCGGAG GCTGGCGCTC AACGATGCGG GGCGCGCCCT GCTGCCCGAG GCGCTGGCGC TGCTGGAGCA GGCCAGGGGC ATAGAGCAGG CGTTTTCGGT GCGGGCCGCC AGCCTGCCCG TGCGTCTGCG CGTGGCAGCC AGCACCACCA TAGGCACCTA TGCGCTGCCA GCCGTGCTCG CGCACCTGGC GCGCAGCCAT CCGCACCTGA GCGTGGACCT GCAGATCGCC AACACGCGCG AGGTGGGCCA GGCCGTGGAA TCGCTGGACG TGGACCTGGG CCTGATCGAG GGCACCAGCC ACTGGCCCGG GCTGGAGGTC GAGCCCTGGA TGCGCGACGA ACTCGTCATC GTGGCTGCAG CACAGGACCC GCTGGTGCAG GCCGCAGGCC AGCGCCCGCT GGGCGTGGCC GCCTTGCGTG GTGCGCGCTG GCTGCTGCGC GAATCGGGCT CGGGCACGCG CGAGATGGTG GAGCATGCCT TGCTGCCGCA TCTGCACCAG CTGCCGGCCG CCGCCACGCT GGGCAGTTCG GAGGCGATTG CGCGCTGCGT GGCGCAGGGC CTGGGCGTCA GCTGCCTGTC GCGCGTGCTG GTGCAGGCCC TGGTCGCCTC GGGAGAGCTG GCCGTGCTGC CGACCACGCT GCCGCGCATG TGGCGGGATT TCTCGCTGGT GCAGCGGGCG GGCAAGCGCC GCTCGCCGGC GCTGGCGGCC TTTGTGCAGG CCTGCCGCCA ACACGCCCAG GACTGA
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Protein sequence | MLHLTLRQLE IFCAVAQAGS TVAAADAVAL SQSATSAALQ QLEQAMGAQL FERVGRRLAL NDAGRALLPE ALALLEQARG IEQAFSVRAA SLPVRLRVAA STTIGTYALP AVLAHLARSH PHLSVDLQIA NTREVGQAVE SLDVDLGLIE GTSHWPGLEV EPWMRDELVI VAAAQDPLVQ AAGQRPLGVA ALRGARWLLR ESGSGTREMV EHALLPHLHQ LPAAATLGSS EAIARCVAQG LGVSCLSRVL VQALVASGEL AVLPTTLPRM WRDFSLVQRA GKRRSPALAA FVQACRQHAQ D
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