| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5703 |
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| Symbol | |
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| ID | 5751323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6339206 |
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| End bp | 6340432 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641300835 |
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| Product | general secretion pathway protein F |
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| Protein accession | YP_001566716 |
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| Protein GI | 160901134 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0555477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0587373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCT TTTCCTTCGA AGCCCTGGAT GCACAAGGTC AGACCCGCAA GGGCACGATC
GAAGCCGACA ACGCGCGCGC CGCGCGCAGC CAGCTGCGGG CCCAGGCCCT GGTGCCCATG
GCCGTGGAGA TCGTGGCCTC GGGTTCCGCG TCCGGCCCGC AGGGCGGCGC CTCGCGCTGG
CTGACCCGCC CCGTCCTTGG CTCCACAGGG CTCACCGTGT GGACGCGCCA GATGGCGGGG
CTGGTCGGGT CAGGCCTGCC CATAGAGCGC GCCCTGGCCG CCCTGTCCGA AGAAGCCGAC
GACCCGCGCC AGCACCACCT CGTGGCCGCG CTGCGCGCCG AGGTCAACGC AGGCTCCACC
TTTGCCCGCG CCCTGGCCCA GCACCCGCGC GAGTTCTCCG ACATCTACTG CGCCGTGATC
GGCGCCGGCG AGGCCAGCGG CAGCCTGGGC CCGGTGCTGG AGCGGCTGGC CGACGACCTG
GAATCGCGCC AGGCCCTGCA GTCCAAGCTT ATCGGCGCAG CCCTGTACCC GGCCATCGTG
ACCCTGGTGG CCATCGTCAT CGTGCTGTTC CTGGTCAGCT ACGTGGTGCC CCAGGTGGCC
AGCGTGTTCG CCGGCACCAA GCGCGCCCTG CCCTGGCTCA CCGTGGCCAT GCTGGCGCTC
AGCGACTTCG TGCGCAGCTA TGGCTGGGCC GCACTGGTCG CCCTGGTGCT GGGCGCCGTG
GGATTCCGGC TGTCCATGAA GAACCCCGCG CTGCGCGAGC GCTTCGACGC TTGGTGGCTG
CGCCTGCCGC TGATCGGCCG GCTGGCGCGC AACTACAACG CGGCACGCTT TGCCGGCACG
CTGGCCATGC TGGCGGGCGC AGGCGTGCCC ATTCTCAAGG CCTTGCAGGC CGCAGCCGAA
ACGCTGGGCA ACCGCGCGCT GCGTGCCGAC GCCATGGACG CGCTGGCCCT GGTGCGCGAG
GGCGCGCCGC TGGCCTCGGC GCTGGCGCAG AAAAAGCGCT TCCCGGGCCT GATCTCCATG
TTTGCCCGCC TGGGCGAGCA GACCGGCCAG TTGCCCGTGA TGCTGCAGCG CGCGGCCAAC
CAGCTGTCCA CCGAGGTGCA GCGCCGCGCC ATGCACCTGG CCACCATCCT GGAGCCGCTG
CTGATCGTGG CCATGGGCAT GGTCGTGGCC CTGATCGTGC TGGCCGTGCT CATGCCCATC
ATCCAGCTCA ACCAGTTCGT CAAATAG
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| Protein sequence | MPAFSFEALD AQGQTRKGTI EADNARAARS QLRAQALVPM AVEIVASGSA SGPQGGASRW
LTRPVLGSTG LTVWTRQMAG LVGSGLPIER ALAALSEEAD DPRQHHLVAA LRAEVNAGST
FARALAQHPR EFSDIYCAVI GAGEASGSLG PVLERLADDL ESRQALQSKL IGAALYPAIV
TLVAIVIVLF LVSYVVPQVA SVFAGTKRAL PWLTVAMLAL SDFVRSYGWA ALVALVLGAV
GFRLSMKNPA LRERFDAWWL RLPLIGRLAR NYNAARFAGT LAMLAGAGVP ILKALQAAAE
TLGNRALRAD AMDALALVRE GAPLASALAQ KKRFPGLISM FARLGEQTGQ LPVMLQRAAN
QLSTEVQRRA MHLATILEPL LIVAMGMVVA LIVLAVLMPI IQLNQFVK
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