| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5700 |
|---|
| Symbol | |
|---|
| ID | 5751320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6336633 |
|---|
| End bp | 6337634 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641300832 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001566713 |
|---|
| Protein GI | 160901131 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0732464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAT TCAATGAAGT CCGTCTGTCC ATGCTCGACC TCGTGGCCGT GCGCGAAGGC
GGCACCGTCG CCGAGGCCCT GGACATTGCG CTGGCCACGG CCCGCAAGGC CGAAGAACTG
GGATTCGAGC GCTACTGGCT CGCCGAGCAC CACAACATGC CCGGCATCGC CAGCTCGGCC
ACGGCCGTGC TGATCGGCCA TATCGCAGGC GGCACCTCGA AGATCCGCGT GGGCTCGGGC
GGCATCATGC TGCCCAACCA TGCCCCCCTG GTGGTCGCCG AAGCCTTCGG CACGCTGGCC
GAGCTGTACC CGGGCCGCAT CGACCTGGGC CTGGGCCGCG CGCCCGGCAC CGATGGCGCC
ACCATGCGCG CCCTGCGCCG CGACCGCGTC GAGACCGAGG AAGACTTCCC GCGCGACGTG
ATGGAGCTGC AGCGCCTGCT GGGCCCGGCC ACGCCCGAGC AAAAGCTGGT GGCCACGCCT
GGCGCGGGCA CCAACGTGCC GATCTGGCTG CTGGGCTCCA GCCTGTTCTC GGCCCAGCTG
GCCGCCCACC TGGGCCTGCC CTACGCCTTT GCCTCGCACT TTGCGCCGCG CATGCTCTAC
CAGGCTGTGC AGCTGTACCG CAGCCTGTTC AAGCCGTCGG CCCAACTGGC CAAGCCCTAC
GTGATCGTCG GCGCCCCCGT GATCGCCGCG CCCACCGATG ACGAGGCCGA GTACCTGGCC
AGCAGTACCT ACCAGCGCGT GCTGGGCATC ATCACGGGCC GGCGCGGACT GCTGCCGCGC
CCCATCGAGA ACTATGCGGC CCAGCTCGGC GAGCAGGAGC GCCGCGCCAT CGGCGACTTC
CTGGCCGTGG CCTCCATCGG CGGCCCGGAC AAGGTGCGCA CGCGCCTGCA AAAGCTGCAG
GCCGACACCG AGGCCGACGA GCTGATCCTG GTCAGCGACG TGTATGACCG CGACCTGCGC
CTGCGCTCGC TGGAGATCAC GGCCGGCGTC ATGGGCCGCT GA
|
|---|
| Protein sequence | MTSFNEVRLS MLDLVAVREG GTVAEALDIA LATARKAEEL GFERYWLAEH HNMPGIASSA
TAVLIGHIAG GTSKIRVGSG GIMLPNHAPL VVAEAFGTLA ELYPGRIDLG LGRAPGTDGA
TMRALRRDRV ETEEDFPRDV MELQRLLGPA TPEQKLVATP GAGTNVPIWL LGSSLFSAQL
AAHLGLPYAF ASHFAPRMLY QAVQLYRSLF KPSAQLAKPY VIVGAPVIAA PTDDEAEYLA
SSTYQRVLGI ITGRRGLLPR PIENYAAQLG EQERRAIGDF LAVASIGGPD KVRTRLQKLQ
ADTEADELIL VSDVYDRDLR LRSLEITAGV MGR
|
|---|
| |