| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5698 |
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| Symbol | |
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| ID | 5751318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6334838 |
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| End bp | 6336199 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641300830 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_001566711 |
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| Protein GI | 160901129 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0566211 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTATC CCCTGCCCTA TGCGTTTGCG CGCACCAGCC AGCTGCTGAT CGAGGACGAC
GGCCACGAGC CCCTGCTCTG GCACGGCCCC TCGCCCGACT GGCAGGCCCT GTCCGAAGTC
CAGCGCAAGC ATGCGGTGCA GCGCTGGCAG ATGCTGGATG CGGGCACGCT GGCGCACCGC
ATCAGCGCCG CCTATTCGCA GGGCGAATCC AGCGCGGCCC TGGTGGTCAG CGAGGTCGAG
TCCGACGCCG ACCTCTCGCG CATGATGCAG GAGCTGCCCG CCGTCGAGGA CTTGCTGGAG
ACTGCGGACG ACGCGCCCAT CATCCGCATG CTCAACGCCC TGCTCACGCA GGCCGCGCGC
GACGGCGCCA GCGACATCCA CATCGAGCCC TACGAGCGCC ACTCCAGCGT GCGCTTTCGC
GTGGACGGCG ACCTGCGGGA GGTCGTGCAG CCCAACCGGG CCCTGCACGC GGCGCTGATC
TCGCGCCTGA AGATCATGGC CGACCTGGAC ATCGCCGAAA AGCGGCTGCC CCAGGACGGC
CGCATCAGCC TGCGCCTGGG CACGCGCGCC ATCGACGTGC GCGTCTCCAC CCTGCCCAGC
GCCCATGGCG AGCGCGCCGT GCTGCGCCTG CTGGACAAGA GCGAGAGCAA GCTCAGCCTG
GAGGCCGTGG GCATGCAGGG CGAGACGCTG AGGCGGTTCA CCCACATGAC GGCCCAGCCC
CACGGCATCG TGCTGGTCAC CGGCCCCACG GGCTCGGGCA AGACCACCAC GCTGTACGCG
GCGCTGTCGC GCATGGACGC CAGCCGCAGC AACATCATGA CGGTGGAGGA CCCCATCGAG
TACGAGCTGG CCGGCGTGGG GCAGACCCAG GTCAACGCCA AGATCGACCT GACCTTCGCC
AAGGCCCTGC GCGCCATCCT GCGCCAGGAT CCGGACGTGA TCATGATCGG CGAAATCCGC
GACTTCGAGA CCGCGCAGAT CGCCATCCAG GCCTCGCTGA CGGGCCACCT GGTGCTGGCC
ACGCTGCACA CCAACGATGC CTCCAGCGCC GTCACACGCC TGATCGACAT GGGCGTGGAG
CCGTTCCTGC TGTCGTCCTC CCTGCTGGGC GTGCTGGCCC AGCGCCTGGT GCGCAAGATC
GACACCACCG AGCCCAGCGG CTACCGGGGG CGCACCGGCA TCTTCGAGAT GCTGGTGGTG
GACGACACCA TCCGCGCGCA GATCCATCGC CAGGCCAGCG AGGCCGAGAT CCGCGACACC
GCGCTGGCCT CGGGCATGCG CCTGATGCGC GACGATGGCG AGCGCCTGGT GCGCGAGGGC
ATCACCACGC CCGAGGAAGT GCTGCGCGTC ACGCGCGACT AG
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| Protein sequence | MRYPLPYAFA RTSQLLIEDD GHEPLLWHGP SPDWQALSEV QRKHAVQRWQ MLDAGTLAHR
ISAAYSQGES SAALVVSEVE SDADLSRMMQ ELPAVEDLLE TADDAPIIRM LNALLTQAAR
DGASDIHIEP YERHSSVRFR VDGDLREVVQ PNRALHAALI SRLKIMADLD IAEKRLPQDG
RISLRLGTRA IDVRVSTLPS AHGERAVLRL LDKSESKLSL EAVGMQGETL RRFTHMTAQP
HGIVLVTGPT GSGKTTTLYA ALSRMDASRS NIMTVEDPIE YELAGVGQTQ VNAKIDLTFA
KALRAILRQD PDVIMIGEIR DFETAQIAIQ ASLTGHLVLA TLHTNDASSA VTRLIDMGVE
PFLLSSSLLG VLAQRLVRKI DTTEPSGYRG RTGIFEMLVV DDTIRAQIHR QASEAEIRDT
ALASGMRLMR DDGERLVREG ITTPEEVLRV TRD
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