| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5693 |
|---|
| Symbol | |
|---|
| ID | 5751313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6328827 |
|---|
| End bp | 6329804 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641300825 |
|---|
| Product | general secretion pathway protein K |
|---|
| Protein accession | YP_001566706 |
|---|
| Protein GI | 160901124 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3156] Type II secretory pathway, component PulK |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.144988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCA CACCCCGCCT CCTGCCCGGC CGCCGCCTCC ACCGTGGCGT GGCCCTGCTG
GCCGCCATGC TCACGGTGAC CCTGGTGGCA ACGTTCGCCG CCACCGCGCT GTGGCAGCAG
TGGCGCAGCG TGGAGGTCGA GACCGCCGAG CGCAACCGCA TGCAGGCCGC CTGGATCCTG
CTGGGTGCGC TGGACTGGTC GCGCGTGGTG CTGGCCGAGG ATGCGCGCAC CAGCCTGCAG
GTGGACCATC TGGCCGAACC CTGGGCCGTG CCGCTGCAGG AGGCGCGCCT GTCCACGTTT
CTTGCGGCGC AGAACAATGT CAGCCAGGTC GATGACGGCA TGGCCGACAT GCAGGACGCC
TTTCTCTCGG GCCAGATCAT CGACCTGCAG TCGCGCCTGA ACCTGCGCAA CCTGCTGAGC
GCCCCCGACA AGCCCGAAAC CCTGCGCCCG CTGTCCCGCC TGCTGGAGCG CCTGAACCTG
CCCCCTGCCT ATGCCACGCA GATCGTCCAG GCCCTGCGCG CAGCCGCCAC CCCTGGCGAG
GGCGCGCAGT TCCTGATGCC GCGCACGCTG CGCCAGTTCG GCTGGCTGGG CCTGCCGCCC
GAGGTCGTCG CGCGCCTGGA GCCCTACATC ACCCTGCTGC CCGAGAACAC GCCCGTCAAC
CTCAACACCG CCAGCGCCGA AGTCATCTGG GCCAGCGTGG AGGACCTGAC CTGGTCCCAG
GCCAGCCAGC TGGTGCAGCT GCGCGCATCG CGCCCGCTGC GCAGCCTGGC CGATGCCTCC
AACGCGCTGG GCCTGCCGCA GAAATTCGAA GGACAGAACC TGTCGGTGGC CACCAGCTTC
TTCGAGGCGC GTGGCCGCAT GCGCCTGGGC GAGATCGTGG CCAGCGAACG CTCCATGTTG
CGTCGCAACA ACATGACAGT CACTACCATC TGGCGTGAGA GGGGGGACTG GGGATTGCCC
GAAGCTCCCG CGCCATGA
|
|---|
| Protein sequence | MMRTPRLLPG RRLHRGVALL AAMLTVTLVA TFAATALWQQ WRSVEVETAE RNRMQAAWIL
LGALDWSRVV LAEDARTSLQ VDHLAEPWAV PLQEARLSTF LAAQNNVSQV DDGMADMQDA
FLSGQIIDLQ SRLNLRNLLS APDKPETLRP LSRLLERLNL PPAYATQIVQ ALRAAATPGE
GAQFLMPRTL RQFGWLGLPP EVVARLEPYI TLLPENTPVN LNTASAEVIW ASVEDLTWSQ
ASQLVQLRAS RPLRSLADAS NALGLPQKFE GQNLSVATSF FEARGRMRLG EIVASERSML
RRNNMTVTTI WRERGDWGLP EAPAP
|
|---|
| |