Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5685 |
Symbol | |
ID | 5751305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6323215 |
End bp | 6324768 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641300817 |
Product | threonine dehydratase |
Protein accession | YP_001566698 |
Protein GI | 160901116 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000112731 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.257645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACC CCCTGACCCC TGCCGACTAC CTGACCAAGA TCCTTACCGC GCGCGTCTAT GACGTGGCCG TGGAGTCGGA CCTGGAGCCC GCCAAGGCGC TGAGCCGCCG CCTGCACAAC AAGGTGCTGC TCAAGCGCGA GGACCAGCAG CCGGTATTCA GCTTCAAACT GCGCGGCGCC TATAACAAGA TGGCGCACCT GTCGGCCGAG CAGTTGGAAA AGGGCGTGAT CTGCGCCTCG GCCGGCAACC ATGCGCAAGG CGTGGCCCTG GGCGCACGCA AGCTCGGCTG CCGCGCCGTG ATCGTGATGC CGACCACCAC GCCCCAGGTC AAGATCGATG CGGTGCAGGC GCTGGGCGGC GAGGTGGAAC TGGCCGGCGA AAGCTATTCC GACGCCTACA AGCACGCCGT CAAGCTGCAA AAGGAAAAGG GCCTGACCTT TGTGCACCCC TTCGACGATC CCTACGTGAT CGCCGGCCAG GGCACGATTG CCATGGAAAT GCTGAGCCAG CTGCAAAAGC TGGGCAGCCC GCGCCTGGAC GCGGTCTTTG TCGCCATCGG CGGCGGCGGC CTGATCTCGG GCGTGGCCAA CTACATCAAG GCCGTGCGCC CCGACGTGAA GGTGATCGGC GTGCACACCA AGGATTCGGA CGCCATGCTG CAGTCCGTGC GCGCCGGCCA CCGCGTGGAG CTGGCCGACG TGGGCCTGTT CGCCGACGGC ACGGCCGTCA AGCTGGTGGG CGAGGAAACC TTCCGCATCG CCCAGGGCCT GGTGGACGAC TACGTGGTGG TCGATACCGA CGCCGTCTGC GCCGCGATCA AGGACATCTT CGTGGACACG CGCTCCATCG TCGAGCCGTC CGGCGCCCTG GCCGTGGCGG CCATCAAGCA GTACGTTGCC AAGCACAAGA CCAAGGGCGA GACCTATGCC GCCATCCTGT GCGGCGCCAA CATGAACTTC GACCGGCTGC GCTTCGTGGC CGAGCGGGCC GAGGTGGGCG AGGAGCGCGA GGCCCTGTTC GCCGTGACCA TCCCCGAGGA GCGCGGCAGC TTCAAGCGCT TTTGCGAAGC GGTGGGCAAG CTGCCCGGCG GCCCGCGCAA CGTGACCGAA TTCAACTACC GCATCAGCAA CGAGAACAAG GCCCATGTCT TCGTGGGCCT GACCACGGCG GCACGCGGCG AGTCCGAGAA GATCGCCAGG AACTTCGAGA AGCAGGGCTT CGAGGCGCTG GACCTGACCT TCGACGACAT GGCCAAGGAG CATCTGCGCC ACATGGTCGG TGGCCATTCG CCGCTGGCGC AGGAAGAGCG CCTGCTGCGC TTCGTCTTCC CCGAGCGCCC CGGCGCATTG TTCAAGTTCC TCAGCCTGAT GGCGCCGACC TGGAACATCT CGCTGTTCCA CTACCGCAAC CAGGGCGCCG ACTACGGCCG CATCCTGGTC GGCATGCAGG TGCCCGCCAA GGATGGCAAG AAATTCGACG CCTTCCTGAG CAATCTTGGC TACCCCTGGG TCGAGGAAAC CGCCAACCCG GCCTACCAGC TTTTCCTCAA GTGA
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Protein sequence | MNHPLTPADY LTKILTARVY DVAVESDLEP AKALSRRLHN KVLLKREDQQ PVFSFKLRGA YNKMAHLSAE QLEKGVICAS AGNHAQGVAL GARKLGCRAV IVMPTTTPQV KIDAVQALGG EVELAGESYS DAYKHAVKLQ KEKGLTFVHP FDDPYVIAGQ GTIAMEMLSQ LQKLGSPRLD AVFVAIGGGG LISGVANYIK AVRPDVKVIG VHTKDSDAML QSVRAGHRVE LADVGLFADG TAVKLVGEET FRIAQGLVDD YVVVDTDAVC AAIKDIFVDT RSIVEPSGAL AVAAIKQYVA KHKTKGETYA AILCGANMNF DRLRFVAERA EVGEEREALF AVTIPEERGS FKRFCEAVGK LPGGPRNVTE FNYRISNENK AHVFVGLTTA ARGESEKIAR NFEKQGFEAL DLTFDDMAKE HLRHMVGGHS PLAQEERLLR FVFPERPGAL FKFLSLMAPT WNISLFHYRN QGADYGRILV GMQVPAKDGK KFDAFLSNLG YPWVEETANP AYQLFLK
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