Gene Daci_5683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5683 
Symbol 
ID5751303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6321669 
End bp6322286 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content69% 
IMG OID641300815 
Productputative ubiquinone biosynthesis protein 
Protein accessionYP_001566696 
Protein GI160901114 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2941] Ubiquinone biosynthesis protein COQ7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000723983 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.587683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA TACTGACTGC CGCCGATGCG GCGCTTCGCA CCCTGTTTGC ACAGCCTTCC 
GCCGCCGAAC GCTCCCCGGC CGCCGGCATC GCGGAGGGAG AGCTGACCGA GGCACAGCGC
CGCCTGTCGG GCGCCTTGAT GCGCGTCAAT CATGTCGGAG AGGTCTGCGC CCAGGCGCTG
TACAACGCCC AGGCCATGGT GACGCGCGAC ATGGTGCTGC GCGAGCACCT GCTGGAGGCA
GCGCGCGAGG AGACCGACCA CCTGGCATGG ACCCGCGACC GGCTCAACGC CCTGGGCGAC
CGGCCCAGCC TGCTGAACCC GCTGTGGTTC GCCGGGGCAT TCGCCATTGG CGTGGTGGCC
GCCAAGATCA GCGACGCGGC CAGCCTGGGG TTTGTGGTGG AGACGGAGGA ACAGGTGTCC
GCCCATCTGG AAAGCCATCT GGGCCTGTTG CCCGAGGAAG ACCGCGCCTC GCTGGCCGTG
GTGGCCCGCA TGAAGGATGA CGAGGAACGC CATGCCGCCG CTGCGCGCGA AGCCGGCGCC
CTGCAATTGC CGCCCCCCGC CCGCGCCTTG ATGCGCCTGG CAGCCAAGGT GATGACGACA
ACCGCCCACC GCATCTGA
 
Protein sequence
MDKILTAADA ALRTLFAQPS AAERSPAAGI AEGELTEAQR RLSGALMRVN HVGEVCAQAL 
YNAQAMVTRD MVLREHLLEA AREETDHLAW TRDRLNALGD RPSLLNPLWF AGAFAIGVVA
AKISDAASLG FVVETEEQVS AHLESHLGLL PEEDRASLAV VARMKDDEER HAAAAREAGA
LQLPPPARAL MRLAAKVMTT TAHRI