| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5681 |
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| Symbol | |
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| ID | 5751301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6319561 |
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| End bp | 6320100 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641300813 |
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| Product | porin |
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| Protein accession | YP_001566694 |
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| Protein GI | 160901112 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00336613 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.546745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTCTT CATTCGTGAA AAAGAGCGTG GCACTGGCGG TGTTGGCAGC AACGGCACCC
TTGGCAGCAT TCGCCCAGCA AAGCAGCGTG CAGCTGTACG GCATCGTCGA TGCCGCTGTG
CGCCACACCA CCAATGAAGG CCCGACCAAG AGCGGCAAGA CCCAGATGAT TGGCGGCGGC
ATGTCGCAGA GCCGCTGGGG CATCAACATC ACGGAGGACC TGGGTGGCGG TCTGGCAGCG
ATTGCCAACC TGGAAGCCCG TTTCCTCACC GACACCGGCG AGCAGGCTGC GGCCAGCTAC
TTCCAGCAAT CCTGGGTCGG TATTCGCAGC AGCAGCTTCG GCCAGGTCAC CCTGGGCCGC
CAGTACAACA TGCTGTTCGA CCTGGTGACC TCCACCTATG CCTCCTTCCC ATATTCGCCG
TACATGGAGG CCTACAAGCC TGAAATCGGC ATGTCCATGG GCGCGCGCGC CAGCAACATG
GTCAAGTACC TGGCCGAGTT CGGCCCCGTG CGCGGCGCCC TGCAGTATTC GTTCGACTAG
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| Protein sequence | MNSSFVKKSV ALAVLAATAP LAAFAQQSSV QLYGIVDAAV RHTTNEGPTK SGKTQMIGGG
MSQSRWGINI TEDLGGGLAA IANLEARFLT DTGEQAAASY FQQSWVGIRS SSFGQVTLGR
QYNMLFDLVT STYASFPYSP YMEAYKPEIG MSMGARASNM VKYLAEFGPV RGALQYSFD
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