Gene Daci_5665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5665 
Symbol 
ID5751285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6300697 
End bp6301659 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content72% 
IMG OID641300797 
Productcobalamin synthesis protein P47K 
Protein accessionYP_001566678 
Protein GI160901096 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0326957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCAGC GGTTGCCGTT CACGGTCATC GGCGGCTTCC TGGGCGCCGG CAAGACCACG 
CTGCTCAACC ACTGGCTGCG CCATGCGGAT GGCCAGCGGC TGGCCGTGCT GGTCAACGAC
TTCGGCGCGC TCAACATCGA TGCAGGCCTG ATCAAGGCCC ACAGCGGCGA CACCATCGCG
CTGACCAATG GCTGCGTGTG CTGCCAGATC GGCGATGACC TGTCCATGGC CCTGATCGGC
GTGCTGCAGC AGCGCGAGCG CTTCGACGCC GTGGTGGTCG AGGCCAGCGG CGTCTCCGAC
CCCTGGCGCA TCGCCCAATT GGGCCTGGCC GATCCCGCAC TGGCGCTGGA CGGCGTCATC
GTGGTCGTCG ATGCCGCTGC CCTGCCCGGG CAGGCGGCCG ATCCGCTGCT GGCCGACACG
CTGCAGCGCC AGGTGGCCAG GGCCGACCTG GTCATCGTCA ACAAGACCGA TCTGGCCGAT
ACCCGGACCC TGGAGCGCGT GCACGGCTGG ATAGCCCGCC ACGCGCCAGC CGCGCAACGC
TGCGATGTGC GCGAAGCCCG GGTGCCCGTG GAACTGCTCA GCGGCGCAGC CCTGATGCGT
GGCGTGCGGG AGGTCTCATG GGGTACTGGC ACTGCGCGCC CCATGCATGG CCGGCAGTTC
GAGACCTGGT CCTGCCAGCC GCCCGGGGGG CTGTGCGAGA CGGCCCTGCA GGCGTGGCTG
CAGGCCATGC CGGCTGGCGT GCTGCGGCTC AAGGGCGTGG TGCAGACCGG GGCGGGCCAG
TGGAGCGAGC TTCAGTTTGC CGGGCGCAGC GGCCGGCTGC GTGCCGCATC AGCGCCCGCG
CCCGCGCAGC AGCAGGTGCC CGCCATCGTG GCCATCGGCC TGGCCGGGCA GTTGCCGGTG
GCGGCGCTGC AGGCGCTGGT GGCAGGCGCT GCGGGCGTCA GGGCTGCGGG CCGTCCCGCA
TGA
 
Protein sequence
MGQRLPFTVI GGFLGAGKTT LLNHWLRHAD GQRLAVLVND FGALNIDAGL IKAHSGDTIA 
LTNGCVCCQI GDDLSMALIG VLQQRERFDA VVVEASGVSD PWRIAQLGLA DPALALDGVI
VVVDAAALPG QAADPLLADT LQRQVARADL VIVNKTDLAD TRTLERVHGW IARHAPAAQR
CDVREARVPV ELLSGAALMR GVREVSWGTG TARPMHGRQF ETWSCQPPGG LCETALQAWL
QAMPAGVLRL KGVVQTGAGQ WSELQFAGRS GRLRAASAPA PAQQQVPAIV AIGLAGQLPV
AALQALVAGA AGVRAAGRPA