Gene Daci_5663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5663 
Symbol 
ID5751283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6298220 
End bp6299635 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content71% 
IMG OID641300795 
Producthypothetical protein 
Protein accessionYP_001566676 
Protein GI160901094 
COG category[S] Function unknown 
COG ID[COG5383] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.458256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0265006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTA CGCCTGCCCA CACCTTCGTG CCCTCCGACG AGATCCGCGC ACGGTTTTCC 
AGCGCCATGT CCGAGATGTA CCGCGATGAA GTGCCCCAGT ACGGCACGCT GATCGAACTC
GTGGCCGACA TCAACCAGCG CACGCTGCAG GCCGAGCCCG CGCTGCTGGC CCGTATGCAG
CGCAGTGGCG AGCTGGCCCG CCTGGGCGTG GAGCGCCACG GTGCCATCCG CGTGGGCACG
GCGGCCGAGC TGTCCATGCT GCGCCGCCTG TTCGCCATCA TGGGCATGGA GCCCGTGGGC
TACTACGACC TGTCGGTGGC CGGCGTGCCC GTGCACTCCA CGGCCTTCCG CCCCGTGGGC
GATGCGGCGC TGCTGGCCAA CCCTTTCCGC GTCTTCACCT CGCTGCTGCG CCTGGACCTG
ATTGCCGACG AGGCGCTGCG CGCCCAGGCC GCCGCCATCC TGGCGCGCCG CAACATCTTC
ACCGAACGCG CGCTGGCGCT GATCGCCCAG TCCGAGGCCA ACGGCGGCCT CACCGATGCC
GAGGCCGATG AATTCGTCGG CGAGGCGCTG GAGACCTTCC GCTGGCACAG CGAGTCCACC
GTGGACGGCA CCACCTACGA CGCGCTGCAC AAGGCCCACC GCCTGATCGC CGACGTGGTC
TGCTTCAAGG GCCCGCACAT CAACCACCTG ACGCCGCGCA CCCTGGACAT CGATGCCGCC
CAGGCCGCCA TGCCCGAGCG CGGCATGGAC GCCAAGGACG TGGTCGAAGG CCCGCCGCGC
CGCGACTGCC CCATCCTGCT GCGCCAGACC AGCTTCAAGG CGCTCAAGGA GACCGTGCGT
TTTGCGGGCG ATGCCACGGG CGCGGGCTCG CACACGGCGC GCTTCGGCGA GATCGAGCAG
CGCGGCGTGG CGCTCACGCG CAAGGGCCGC GCGCTCTACG ACCAGCTGCT GGCCCAGGTG
CGCGACATGG GCAGCGCAGG CAGTGCCGCG CTCGACTACG GCAGCCGCCT GGCCCAGGTC
TTCGAGGCTT TCCCCGACAC CCATGAGCAG CTGCGCCGGC AAGACCTGGC CTTCTACCGC
TTCACGTTGA GCGACGAGGG AGCCGCCCTG GCCGCAGGCG AGGCCGCAGC GGCCGCCGCC
TCGGACCTGG ACGCCCTGAT CGCCCGCGGC CTGGCCCAGG CCGAGCCCAT CGTCTACGAG
GACTTCCTGC CCGTGAGCGC GGCCGGCATC TTCCAGTCCA ACCTGGGCGG CGAAGAGCAA
AAGCAGTACG CGGCCCATGC GGCCCAGCAG GCCTTCGAGG CCGACCTGGG TGCCCGCGTG
CATGACGAGA TCGCGCTGTA CGAGCAGGCG CAGCAGCGAT CCATCGACCA GCTGCGCAGC
GCGCTGCGCG GCCAGGCCAC CAAGGTCGCC GCATAA
 
Protein sequence
MSSTPAHTFV PSDEIRARFS SAMSEMYRDE VPQYGTLIEL VADINQRTLQ AEPALLARMQ 
RSGELARLGV ERHGAIRVGT AAELSMLRRL FAIMGMEPVG YYDLSVAGVP VHSTAFRPVG
DAALLANPFR VFTSLLRLDL IADEALRAQA AAILARRNIF TERALALIAQ SEANGGLTDA
EADEFVGEAL ETFRWHSEST VDGTTYDALH KAHRLIADVV CFKGPHINHL TPRTLDIDAA
QAAMPERGMD AKDVVEGPPR RDCPILLRQT SFKALKETVR FAGDATGAGS HTARFGEIEQ
RGVALTRKGR ALYDQLLAQV RDMGSAGSAA LDYGSRLAQV FEAFPDTHEQ LRRQDLAFYR
FTLSDEGAAL AAGEAAAAAA SDLDALIARG LAQAEPIVYE DFLPVSAAGI FQSNLGGEEQ
KQYAAHAAQQ AFEADLGARV HDEIALYEQA QQRSIDQLRS ALRGQATKVA A