Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5659 |
Symbol | |
ID | 5751279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6293971 |
End bp | 6294555 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641300791 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001566672 |
Protein GI | 160901090 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0433662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00993278 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAACTT CCCAGCCATC CTTCGAGTCA TTGCCTCCCC GCGAGCGCAT CCTGGTGGCC GCCCATGGCC TCTTCTACGC AGAGGGCATC CGGGCCACGG GTGTGGACCG GATCATCGAG CGGTCGTCGG TCAGCAAAGT CACCTTCTAC CGCCAGTACG CCAGCAAGGA CGACCTGATC CGGGCGTACC TCGACTACCG CCATGAACGG TGGATTTCCT GGTTCCAGGC CAGCCTGGCG CAGGCGAATG ACGCGGGCTC GCCAGCGTTG GAGGCCCTCG CAACCACCCT CAGGAGCTGG TTCGGCCAGC CCGACTTTCG GGGCTGCGCC TTTCTCAACG CCGCCGCCGA ACTGGGCTCG TCCGACCCTG AGATCCTGGC GACGGTCCGG CGGCACAAGC AGGAAATGTC GTCCGTGCTG GATCGCCTGT TCGGTGGCCA TCCCGTGTCC GTGGGCGCTG CGCTCACCCT GGTGGCGGAC GGCGCCATCG TCCATGCGCA GATGGGCCAG CCGATCGATG AAGTCATGGA GAACTTCAAG TCAGCGGCCG AGGGGGTTGT GGATCGGCCC CTGCCCTTGC GCTAG
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Protein sequence | MKTSQPSFES LPPRERILVA AHGLFYAEGI RATGVDRIIE RSSVSKVTFY RQYASKDDLI RAYLDYRHER WISWFQASLA QANDAGSPAL EALATTLRSW FGQPDFRGCA FLNAAAELGS SDPEILATVR RHKQEMSSVL DRLFGGHPVS VGAALTLVAD GAIVHAQMGQ PIDEVMENFK SAAEGVVDRP LPLR
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