| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5634 |
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| Symbol | |
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| ID | 5751254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6265938 |
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| End bp | 6266915 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641300767 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001566648 |
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| Protein GI | 160901066 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00249387 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACCTGC CCAGCGTCAA GCTCTTCCTC GAGGTCTCCG AAGCCGGCAG CATCAGCAAG
GTCGCGGCAC GGCGGCACAC CGTGCAGTCG CACATCAGCC GGCAGATCAG CGAATTCGAA
GCGTCTCTGG GCGGCCCCTT GCTGCGGCGC ACGGGCCGGG GCGTCACGCT GACGCCGCTG
GGCGCGCGGG CCGCGCTGCG GCTGCGCAGC TGGCTGCAGG AAACCGAGCA ATTGCAGGAA
ACGCTGCGTG CGGACGCAGG CCAGCTATGG GGCGAGGTGC GGCTGGGCAT CGTGCCCTCG
GGCGCGCACC CGCTGATGAC GCATGTGTTC GACTGGCTGC AGCGCGAGCA CCCCGGCATA
CGCCTGAACA TCACCGAGGC CCAGGGCACG GAGCTCGACG CGCTGCTGGA CAGCGGCGCC
GTGGACCTGG CCATCCTCTT TCGCTTCGCG CGCCCGGCCG GCGGCGACGA GCGGCTGCTG
AGCACCGCGC ACAGCTATCT GGTGTCGCGC CCTGGCGACC CCTTGACCCT GGCGCCCACC
ACGGAGTTCG CCGCGCTCGA CGGCCTGCAG CTGGTGCTGC CGCGCCGCCC CAGCCATTGG
CGCGACGCGC TCGATGAGGC CGCGCACAGC CACGGCTTTC GGCTCGCGGC GGCGGCCGAG
GCCGACTCGC TGACCGTGCA AAAGGAGCTC GTGGCCCATG CGCCCGGCCT CTACTCGGTG
ATCGGCCCGT ATTCCATCGA TGCCGAACTG CGCCAGGGCC GGCTGCAGGC CAGCCGCCTG
GTCAACCCCG GCCTGGTGCG CCATGTGACG CTTGCCCTGC CCCGGCACGG CAAGCTCACC
CAGGCCTGCC GCGTGGTGGG CGATGCCATC GAGGCCTTGA CGCAGGCCTG GGGACAGCAG
CTGTCGCCGG GGCCGCTGAG CACCTCGGGA CTGCTCGGGG AGCCTGCGCG GCCGAAGGGC
AGGCCCCGCC CTCAATAG
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| Protein sequence | MHLPSVKLFL EVSEAGSISK VAARRHTVQS HISRQISEFE ASLGGPLLRR TGRGVTLTPL
GARAALRLRS WLQETEQLQE TLRADAGQLW GEVRLGIVPS GAHPLMTHVF DWLQREHPGI
RLNITEAQGT ELDALLDSGA VDLAILFRFA RPAGGDERLL STAHSYLVSR PGDPLTLAPT
TEFAALDGLQ LVLPRRPSHW RDALDEAAHS HGFRLAAAAE ADSLTVQKEL VAHAPGLYSV
IGPYSIDAEL RQGRLQASRL VNPGLVRHVT LALPRHGKLT QACRVVGDAI EALTQAWGQQ
LSPGPLSTSG LLGEPARPKG RPRPQ
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