| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5633 |
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| Symbol | |
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| ID | 5751253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6264922 |
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| End bp | 6265782 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641300766 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_001566647 |
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| Protein GI | 160901065 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0069518 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAAACTCG CCAGCTTCAT CCATGCCGGA CAGCCCCGCT ACGGGCAGGT TCTGGCCGAG
CGCTTCCTGC TGCCGCCCGC CGACTTTCTC GCCCGCCATC CCGACCTGCT GTCCGTGCTG
CGCGCACAGG CGCTGGGCGA GCTGGAGCAG GCCCTGCAGG CCGGCGCCGT GTCCGTCGAT
GCGGCGCAGA CCCAGGCGCT GCCCGTCATC CCCAACCCCG GCAAGCTCAT CTGCGTGGGC
CTGAACTACA AGACCCATGT GGCCGAGACG CGGCGCGCCG ACAGCGAGCA CCCGTCGCTG
TTCCTGCGCT TCAACGACAG CCTGGCCGCC GATGGCGACG AGCTGCTGCG CCCGGCCTTT
TCGGAGCGTT TCGACTGGGA GGGCGAGCTG GCCTTCGTCA TCGGCCGGGG CGGGCGCCAC
ATTGCAAAGG AAGATGCCTT CGACCACATC GCCGGCTATG CCTGCTTCAA CGATGTGAGC
GTGCGTGACT GGCAGCGCCA TACGCACCAG TTCACGCCCG GCAAGAACTT TCCCGGCACG
GCGCCCTTCG GCCCCTGGCT GGTCACGCGC GACGAGGTGG CCGACGTGCG CAGCCTGGCG
CTGCAGACCC GCCTGAACGG CAGCGTGATG CAGCAGGCCA GCCTGGGCGA CCTGATCTTC
GACATCCCCA CCATCGTGGC CTATGTGTCG CGCTTCACGC CGCTGTCGCC CGGCGACGTG
ATCGCCACGG GCACGCCGGG CGGCGTGGGC GACCGCCGCG AGCCGCCTCT GTACATGAAG
CATGGCGATG TGGTCGAGGT CGAGATCACG GGCCTGGGCG TGCTGCGCAA CCGTATCGGC
ACGGATAGCG CTGCCGTCTG A
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| Protein sequence | MKLASFIHAG QPRYGQVLAE RFLLPPADFL ARHPDLLSVL RAQALGELEQ ALQAGAVSVD
AAQTQALPVI PNPGKLICVG LNYKTHVAET RRADSEHPSL FLRFNDSLAA DGDELLRPAF
SERFDWEGEL AFVIGRGGRH IAKEDAFDHI AGYACFNDVS VRDWQRHTHQ FTPGKNFPGT
APFGPWLVTR DEVADVRSLA LQTRLNGSVM QQASLGDLIF DIPTIVAYVS RFTPLSPGDV
IATGTPGGVG DRREPPLYMK HGDVVEVEIT GLGVLRNRIG TDSAAV
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