Gene Daci_5629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5629 
Symbol 
ID5751249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6259562 
End bp6260647 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content72% 
IMG OID641300762 
Productcobalamin synthesis protein P47K 
Protein accessionYP_001566643 
Protein GI160901061 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.431844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.176187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGC ATTTCTCCAG CCTGCTGGCC CTGCCCGAAG CGGCGGGGCA GCGCATTCCG 
GTCACCGTGC TCACGGGCTT CCTGGGCAGC GGCAAGACCA CGCTGCTCAA CCGGCTGCTG
GCGCTGCCGG ACCTGCACGG GACGGCCGTC ATCGTCAACG AGTTCGGTGC GGTCGGCATC
GACCAGGACC TGACCAGCCT GGCCTGCGAG GACACGGTGC TGCTGGCCAA TGGCTGCCTG
TGCTGCAGCG TGCGCGGCGA TCTGGTGGAG GCGCTGGAGC GCCTGGCCCT GCGCGAACAG
GGCGCGCCGC GCCGCGTGCT GATCGAAACC AGCGGCCTGG CGGACCCGGG GCCGATACTG
CGCTCCTTCC TGGGCGAGCC CGCCGTGCGG GCGCGCTATG CGCTGGCCGG CGTGGCCTGC
ACGGTCGATG CCGTGCTGGG CAGCGCCACG CTGGCAGGCT ATCCCGAAGC GGTGCGGCAA
CTGGCCGTGG CTGACCTGGT GCTGCTGACC AAGACAGATT TGCTGGGCGG CGCACAGCCC
GCTGCGCAAC TGCGGGCCCA GGTGCAGGCC ATCAACGGCG AGGCGCCACA AGGCATGGAC
CCCGCCCACC ATGTGGCGCT GCTGCAGCGG CTGATGTCGG AAGGCGCGAC GGGGCAGGAG
GACGCCGCTG CGGGCATGCT CCAGACGCCC GGCTACCGGG CCATGGCTCC GGTGACAGCT
CCGGTGACAG CGCCGGCAGG CGCGCACCGC GACGGCATCT CGTCCTTTGT GCTGCAGCGC
GACGAGCCCC TGCCCGCGCA GGCGTTCGGC GAATGGATGG ACTGGGTCAC GGCCATGCGC
GGCGATGACC TGCTGCGCGT CAAAGGCATC GTGCACCTGC AGGAGCACCC GGACCAGCCC
CTGGTCATCC ATGGCGTGCA GCACCTGTTC GCCCCGCCGC AGACGCTGCC CCGCTGGCCG
GGTACCGACC GGCGCACGCG CATCGTCTTC ATCACGCGGG GGCTGGATGC CCAGGCCCTG
GACGACACGC TGAGCGTGCT GGTGCGCAGG CACAGGCGGC GCGCGCCGAA TCAGGACCCG
GGCTGA
 
Protein sequence
MSGHFSSLLA LPEAAGQRIP VTVLTGFLGS GKTTLLNRLL ALPDLHGTAV IVNEFGAVGI 
DQDLTSLACE DTVLLANGCL CCSVRGDLVE ALERLALREQ GAPRRVLIET SGLADPGPIL
RSFLGEPAVR ARYALAGVAC TVDAVLGSAT LAGYPEAVRQ LAVADLVLLT KTDLLGGAQP
AAQLRAQVQA INGEAPQGMD PAHHVALLQR LMSEGATGQE DAAAGMLQTP GYRAMAPVTA
PVTAPAGAHR DGISSFVLQR DEPLPAQAFG EWMDWVTAMR GDDLLRVKGI VHLQEHPDQP
LVIHGVQHLF APPQTLPRWP GTDRRTRIVF ITRGLDAQAL DDTLSVLVRR HRRRAPNQDP
G