| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5625 |
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| Symbol | |
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| ID | 5751245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6255184 |
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| End bp | 6256191 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641300758 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001566639 |
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| Protein GI | 160901057 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.317407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.166856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTC TGGACAGCCA GCACGCCGAT GAACTGGCGG CCCTGGTGGC GCTGCATGAA
CAAGGCTCCT TCGCTGCGGC GGGGCGGGCC TTGCTGCGCC ATCCGTCCGT GCTGTCCAAA
CGCCTGAACG CGCTGGAGAC CCGGCTGGGC GTGCGGCTGG TGGAGCGCAG CACACGCCAT
CTGCACCTGA CCGACGAGGG CCTGCGCCTG GTGGACAAGG TGCGCCAGGC GGCCGGCCTG
ATCGCCGATG CCCAGAAGGA GGCGGCCCAG GGCGCCTCGC AGGCGCGGGG CCGGCTGCGG
CTGTCGCTGC CGGCCGCCAT GGGGCGGCGC TGGCTCAGCC CGCTGCTGGC CGAGTTTGCG
CTGGCCCATC CGCAGATCGT GCTGGAGGTG GAGTATGCGG ACCGCTTCGT GGACATCGTG
GGCGAGCGCT TCGACGCGGC GGTGCGCATA GGCCGGCTGG CGGACAGCCG TCTCGTGGCG
CTGCGGCTGG GCGGGCACCA GCGCATCCTG GGCGCCGCTC CCGCCTACCT GCAGGCCCAC
GGCACGCCGG TGCACCCCGA GGACCTGGCG GCGCACCGCT GCCTGGGCTT CACGGGGCTG
CAATCGTTTC CGCAATGGGA GCTGGTGCAC GGTGGCACAT CGGGCGATGT GCCTCAGGGC
CAGGCCCGGC ACACCGTGCT GGTGCGCGGC CCCATGGTCA GCAATGACAG CGAGGCCCTG
CTCACGGCCG CCGTCATGGG CGTGGGCATT CTGGCTGGCG GCGACTGGCT GATGAGCGAG
CACATGGCCG CAGGCCGGCT GGTGCGGGTG CTGCCGCAAT GGCGCCTGGA TGGCGCCTCG
GGCATCTACT TCGTGCGGCC CTCGGCGGCG TTCAGCAGCG CGGCCATGAC GGCGCTGCGC
GACTGCCTGG TGCGGTGGTT TGCCACGCGC AGCCCCTGGC GCACGGGGCA TGACACACTG
GCGCCGCCCC CATCCCTGCC CCCGCCCTTT TCCGCATCCG CTCCATGA
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| Protein sequence | MNLLDSQHAD ELAALVALHE QGSFAAAGRA LLRHPSVLSK RLNALETRLG VRLVERSTRH
LHLTDEGLRL VDKVRQAAGL IADAQKEAAQ GASQARGRLR LSLPAAMGRR WLSPLLAEFA
LAHPQIVLEV EYADRFVDIV GERFDAAVRI GRLADSRLVA LRLGGHQRIL GAAPAYLQAH
GTPVHPEDLA AHRCLGFTGL QSFPQWELVH GGTSGDVPQG QARHTVLVRG PMVSNDSEAL
LTAAVMGVGI LAGGDWLMSE HMAAGRLVRV LPQWRLDGAS GIYFVRPSAA FSSAAMTALR
DCLVRWFATR SPWRTGHDTL APPPSLPPPF SASAP
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