Gene Daci_5624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5624 
Symbol 
ID5751244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6254297 
End bp6255187 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content71% 
IMG OID641300757 
Producthypothetical protein 
Protein accessionYP_001566638 
Protein GI160901056 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.353351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.158728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAA AAACCTCGCC GCCCGCCATG GCGGCCGCCT TGCTTCCCTG GCTGTTCGTG 
CTGCTGTGGA GCACGGGCTT CATCGGCGCC AAGTTCGGCC TGCCCTATGT GGAGCCGCTG
ACCTTTCTGA CGCTGCGCTA TGCCATCGTC CTGGTGCTGA TGGCGGCGGT GGCCCTGGTG
CTGCGCGCGC CCTGGCCGCG TTCGGCACGC CAGTGGCTGC ACATTGGCGT GTCAGGGCTG
TTCGTGCATG GCGTGTACCT GGCCGGGGTG TTCACGGCCA TCGCCCACGG CCTGCCTTCG
GGCGTGACGG CCCTGGTGGT GGGGCTGCAG CCGCTGATCA CGGCCCTGGT GGCCGGCACC
TTGCTGGGCG AGTCCGTGCG GCCCCGGCAG TGGGCCGGGC TGGCGCTGGG CTTCACGGGC
GTGGCCCTGG TGGTGGCGGG CAAGATCGCC TCGGTGCCGG TCCATGCCCT GCTGGCCATG
CTGGTGCCGG CCGTGGTGGC TCTGGCCGGC ATCACGGCCG GCACGCTGTA CCAGAAGCGG
TTCTGTCCAT CGTTTGATCT GCGCACGGGC TCGGTCATCC AGTACCTGCC CTGCCTGGTG
GCGACGGGGG CGCTGGCCCT GGCCACCGAA ACCATGCAGG TGCGCTGGAG CGGCGAGTTC
CTGTTCGCGC TGGGCTGGCT GGTGCTGGTG CTGTCCGTGG GCGCGGTCAG CCTGCTCAAC
CTGCTGATAC GCCGCGGCGG CGCCGTGCAC GTGGCCAGCC TGTTCTACCT GACGCCACCG
GCCACGGCCC TGATCGCCTG GGCCATGTTC GGCGAGACGC TGGGCGGCCT GGCGCTGGCG
GGCATGGCCT TGACGGCAGC CGGCGTGTGG CTGGCGCGGC AGGGGCGCTA G
 
Protein sequence
MTQKTSPPAM AAALLPWLFV LLWSTGFIGA KFGLPYVEPL TFLTLRYAIV LVLMAAVALV 
LRAPWPRSAR QWLHIGVSGL FVHGVYLAGV FTAIAHGLPS GVTALVVGLQ PLITALVAGT
LLGESVRPRQ WAGLALGFTG VALVVAGKIA SVPVHALLAM LVPAVVALAG ITAGTLYQKR
FCPSFDLRTG SVIQYLPCLV ATGALALATE TMQVRWSGEF LFALGWLVLV LSVGAVSLLN
LLIRRGGAVH VASLFYLTPP ATALIAWAMF GETLGGLALA GMALTAAGVW LARQGR