| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5623 |
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| Symbol | |
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| ID | 5751243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6253241 |
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| End bp | 6254212 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641300756 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001566637 |
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| Protein GI | 160901055 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.919335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.153906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATCA ATGAACTGCG CGCCATCGCC ACCTTTGCCA AGGCGGTCGA GCTGGGCAGC
CTGCGCCAGG CGGCGCTGTC CCAGGGCGTG AGCCCCCAAG CCGCCAGCCA GGCGGTGGCC
CATCTGGAGC AGCACCTGGG CGTGCGCCTG CTGCACCGGA CCACGCGCAG CCTGGCGCTG
ACCGAGGAGG GCCAGCGTTT CCTGCAGGAC ACCCAGCCGG CGCTGGCCGC GCTGGACCGC
GCACTGAACC TGGCACGCGA CAGCCGCGAG GGCATTGCGG GGCCGTTGCG CATCGTGGGC
CCCAAGTCCT GCTTTGCGCC CGTGCTGATG CCGCTGCTCG ATGAGTTCTG CCGCCTGCAC
CCGGGCATCG TCCCCGATGT GCGGCTGGAC GACGGCATAG GCAACTGGGT GCTGGACCGG
GTCGATGCGG GGTTTCGCAT CGGCGCCTCG CCCGATGAAA GCGTGATCGG GCGGCGGCTG
TTTCCCGTGC AGCTCATCGT CTGCGCGGCG CCGCAGTACC TGCAGCGCCA TGGCGTGCCC
CGGTCGCTGG ACGAGCTGGC CGCGCACCGC TGCAGCATGT TCCGCCATGC GGCCACGGAC
ACGGTGATGC CCTGGTACCT GCCGGTCGAT GGCGAGCTCA CGCACCGCTA CCTGCAGCCG
GCCCTGTCCA CCAACGATGC CGAGCTGGAG CTGCATGCCG TGCTGGCCGG CCAGGTGCTG
GGCCAGCTGT CCAACATCTG CGCGGCCGCG CACATCCGCG CGGGGCGCCT GGTGCCCGTG
CTGCTGGCGC ATGTCAGCGA ACACATCGGC CTGCATGTCT ACTACGGCAG CCGCGACGCG
CTGCCCCGGC GCGTGCGTGC CTTCATCGAC CTGGCCGTGC AGCGGCTGCA GGACTGCCCG
GACTATCTGC TGTCCATGGA AGAACTGGAA AGGGCGGCGG CCGCAGGTGC CGCCGCCCTT
TCCGGCGGCT GA
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| Protein sequence | MPINELRAIA TFAKAVELGS LRQAALSQGV SPQAASQAVA HLEQHLGVRL LHRTTRSLAL
TEEGQRFLQD TQPALAALDR ALNLARDSRE GIAGPLRIVG PKSCFAPVLM PLLDEFCRLH
PGIVPDVRLD DGIGNWVLDR VDAGFRIGAS PDESVIGRRL FPVQLIVCAA PQYLQRHGVP
RSLDELAAHR CSMFRHAATD TVMPWYLPVD GELTHRYLQP ALSTNDAELE LHAVLAGQVL
GQLSNICAAA HIRAGRLVPV LLAHVSEHIG LHVYYGSRDA LPRRVRAFID LAVQRLQDCP
DYLLSMEELE RAAAAGAAAL SGG
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