Gene Daci_5603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5603 
Symbol 
ID5751223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6230999 
End bp6231850 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content69% 
IMG OID641300736 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_001566617 
Protein GI160901035 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.865729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.897415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCC TGTTCCGACT GTTTGCTGCA CTGCCTTTGT GGCTATTGCA CCCCCTTGGC 
GCGCTCATGG GCTGGGTGGC GTTCGCCGCT TCGCCCACGT ACCGGCGCCG CTTTCTGGCC
AACGCCCGGC AGGCCGGCTA CGGCCTGGGC GCCGTGGCGC CGGCCGTGGG ACACGCGGGG
CGCATGGTGG CGGAGCTGCC GCGCATGTGG ATGGGCAGGC AGCCGAGCTG CGAGATGCAC
AACGAGGAAT GCGTGCGCCG GGCCTACGCG GCCGGGCGCG GCATCATCTT TCTGACGCCG
CACCTGGGCT GCTTCGAGCT GTCAGTGCAG CATGCGGCGC GGCAATGGTC GGCCGAGCAT
GGCGAGATCA CCATTCTCTA CCGCCCCGCG CGCCAGCCCT GGCTGGCCCG CGTCATGGAG
ACGGCGCGCA ACCGCCCCGG CGTGCAGGCC GTGCCGACCA CGCTGGCCGG CGTGCGCCAG
ATGATCAAGG CGCTGCGCAA GGGCGCGGCC GTGGGGCTGC TGCCAGACCA GGTTCCGCCC
GAGGGGCAGG GCGTCTGGTC GCCGTTCTTC GGCCGTGATG CCTATACGAT GACGCTGGCG
GCGCGGCTGG CGTTGCAGAC GGGGGCCGCG GTGATCGTGG CCCGTTGTGA GCGCTTGTCC
TGGGGGCGGG GCTATGCGCT GTATCTTGAG GAGTTGCCCG TGCCCTTGTC CGAGAATCTG
GAAGCTGCGG TGCAGCAGAT CAACGAGGCG ATGGAGCAGA CCATCCGCCA ATGCCCGCAG
CAGTACCTGT GGGGTTATGC GCGCTACAAG CAGCCGCGCC GTGAAGCACC TGCTGGCGAG
GTGGGTGCAT GA
 
Protein sequence
MPSLFRLFAA LPLWLLHPLG ALMGWVAFAA SPTYRRRFLA NARQAGYGLG AVAPAVGHAG 
RMVAELPRMW MGRQPSCEMH NEECVRRAYA AGRGIIFLTP HLGCFELSVQ HAARQWSAEH
GEITILYRPA RQPWLARVME TARNRPGVQA VPTTLAGVRQ MIKALRKGAA VGLLPDQVPP
EGQGVWSPFF GRDAYTMTLA ARLALQTGAA VIVARCERLS WGRGYALYLE ELPVPLSENL
EAAVQQINEA MEQTIRQCPQ QYLWGYARYK QPRREAPAGE VGA