Gene Daci_5592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5592 
Symbol 
ID5751212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6218265 
End bp6219689 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content68% 
IMG OID641300725 
Productmannitol dehydrogenase domain-containing protein 
Protein accessionYP_001566606 
Protein GI160901024 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.697977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA TTGTTCCGCA TCTTTCCAGA CCCACGGTGC TGCACCTGGG CCTGGGTTCC 
TTTCACCGTG CGCACCAGGC CGCTTATCAA CAGCGGCTGA TCGATGCCGG GGACACGCAA
TGGGAGCTGG TGGGGGCCAA CCTGCGCTCC GACATGGCGC AGACGCTGGA GGCGCTGGCG
CGCCAGGGAG GGGCTTACAC ACTGGAGACG ATTGCGCCTG GCGGATCGGT GCGCTACCAA
CGCATCGAGG CCCTGCGCGA AGTGATCCCC CATGCGCCCG GGCTGGCCGC CGTGATTGCG
CGCGGAGCCA GCCCCTGCAC ACGTGTCATC TCCCTCACCG TGACCGAGGC TGGCTACTAC
CTCGATGGCA GCGGCGTGCT GGACACCGGC AGCCCGGAGC TTGCAGCCGA CATCGGCCGC
ATGCGCCAGG GGCAGGCCGG AGAGACGATC TATGGCGTGC TGTGCGCCAT CCTGCAGTTG
CGCCGCTGTG CTCATGCCGG CCCGGTCACG CTGCTGAGCT GCGACAACCT GCGCCACAAC
GGCGATCGCC TGCTGGCCGG GCTGCTGGCC TTCATGCAAC TGGCGCAACT GCAGGAACTG
GCCGAGTGGG CTGGGCACAA CATCAGCTGC CCGAATGCCA TGGTCGACCG CATCACCCCG
CGCCCGCCGC CGGAGCTGCG CGAGCGCGTG CAGGCTGCGA CGGGCTGGGA CGATGCGGCC
GCCGTGACGG CCGAAAGCTT TTCACAGTGG GTGATAGAGG ACCGCTTCGT CGCAGGCCGT
CCGCCCTGGG AGCGCGTGGG CGTGGAGATG GTGTCTTCCG TGGCCCCCTA CGAGGAGGCC
AAGATCCGCA TCCTCAACGC CAGCCACAGC TGCATTGCCT GGGCCGGCAC GCTGGCGGGC
CTGCGCTTCA TCCACGAAGG CAGTGCCGTG CCGGCGATAC GCCAGATGGC ATGGGACTAT
GTGACTCAGG ACGTGATTCC CTGCCTTGCA ACACCCGGCA AGGCATCGGC CCTGGACCTG
CCGGCCTACC GCGACACCGT GCTGGAACGC TTCGGCAACC CTGCGATACG CGACACCAAC
CAGCGCGTGG CGGCCGACGG CTTTGCCAAG ATCCCGGGCT TCATCGCGCC CACGGTGCGC
GAGCGCATCG CGCAGGGCGC GTCCATGGAT GCCGTGGCCA TGCTGCCGGC GCTGTTCCTG
GTTTTTCTGC AGCGCTGGCA CCATGACACA CTGCCCTATG CCTACCAGGA TCAGGCCATG
GACTCCGCAG TGGCACACGC CATCTGCGCC GCCGCCGACC CTGTGGCCGC GCTGTGTGCC
GAAGTGCCCT TGTGGGGTGA GGCTGCGGGC CATCCGCATC TGGTGGAGGC TGTCCGCCGT
GCCACAGACC GTGTCCATGC TTTTGTCCAA CAGGCAGCGA GGTAG
 
Protein sequence
MNAIVPHLSR PTVLHLGLGS FHRAHQAAYQ QRLIDAGDTQ WELVGANLRS DMAQTLEALA 
RQGGAYTLET IAPGGSVRYQ RIEALREVIP HAPGLAAVIA RGASPCTRVI SLTVTEAGYY
LDGSGVLDTG SPELAADIGR MRQGQAGETI YGVLCAILQL RRCAHAGPVT LLSCDNLRHN
GDRLLAGLLA FMQLAQLQEL AEWAGHNISC PNAMVDRITP RPPPELRERV QAATGWDDAA
AVTAESFSQW VIEDRFVAGR PPWERVGVEM VSSVAPYEEA KIRILNASHS CIAWAGTLAG
LRFIHEGSAV PAIRQMAWDY VTQDVIPCLA TPGKASALDL PAYRDTVLER FGNPAIRDTN
QRVAADGFAK IPGFIAPTVR ERIAQGASMD AVAMLPALFL VFLQRWHHDT LPYAYQDQAM
DSAVAHAICA AADPVAALCA EVPLWGEAAG HPHLVEAVRR ATDRVHAFVQ QAAR