Gene Daci_5589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5589 
Symbol 
ID5751209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6215401 
End bp6216168 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content63% 
IMG OID641300722 
Productcytochrome c class I 
Protein accessionYP_001566603 
Protein GI160901021 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.6296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCT CTGTGCGCAG GGGCGAAACC AGGGTTCCTG ACGATATCAA TCACAGGGGA 
CCCCATTGTA GAATCCGCCG AATTTTGCGC TTTCAACAAC AGAACCACGC CCTCGATATG
AAGTTGCTTG CCTCTTTGCT GACGGCTGCC ATTCTTGCTG CAGCCCCCGC CTTTCCCGCT
TTCTCCGCTG GCGAGGCACC TGCTGCCCCG GCTCAGCCGA AGGCGGCCAA GGCCGATCTG
GCGAAGGGCG AGGCCAGCTA CACCGCCGTC TGCGCGGCAT GCCATGCGGC CGACGGCAAT
TCCACCATCC CGCTGCAGCC CAAGCTGGCC GGCCAGCATC CCGAGTACCT GGTCAAGCAG
TTGCTGGAGT TCAAGGGCGA CAAGCGCAAG GACCCCGTGA TGAAGGGCTT TGCCAGCATG
CTCAGCGAGC CTGACATGAA GAACATCGCC GCCTGGCTGC ACACGCAAAA GCCCAAGGAC
GGCTTTGCCA AGGACAAGGA CTTGGTGGCC ATGGGCGAGC GCATCTACCG CGGCGGCATC
CAGGAGCGCA ACATTGCTGC CTGCGCGGGC TGCCACAGCC CCAACGGCGC CGGCATTCCA
GCCCAGTACC CGCGCCTGGC GGGCCAGCAT GCCGACTACA CCACGACCCA GCTCACGGCC
TTCCGTGACG GCAAGCGCGG CAATAGCATT CAGATGACGC AGGTTGCTGC CAAGCTTAAC
GATCGCGAAA TCAAGGCCGT GGCAGACTAC ATCGCTGGCC TGCGTTGA
 
Protein sequence
MFSSVRRGET RVPDDINHRG PHCRIRRILR FQQQNHALDM KLLASLLTAA ILAAAPAFPA 
FSAGEAPAAP AQPKAAKADL AKGEASYTAV CAACHAADGN STIPLQPKLA GQHPEYLVKQ
LLEFKGDKRK DPVMKGFASM LSEPDMKNIA AWLHTQKPKD GFAKDKDLVA MGERIYRGGI
QERNIAACAG CHSPNGAGIP AQYPRLAGQH ADYTTTQLTA FRDGKRGNSI QMTQVAAKLN
DREIKAVADY IAGLR