| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5587 |
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| Symbol | |
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| ID | 5751207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6211741 |
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| End bp | 6213081 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641300720 |
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| Product | cytochrome c-type biogenesis protein CcsB |
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| Protein accession | YP_001566601 |
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| Protein GI | 160901019 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.405546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCG CCACTACCAC GACGACTTTG ACGCTCAACG AGGGCTTCTT CGCCCGCCGC
AACTGGTTCG ACTGGGTGTT CGCGGCCCTG GTGGCGGCGG GACTGCTGTA TGCGCTGCAG
CGCTATGGCG AGTACATGGA TGTCTATGAA AAGTGCATCC TGGTCGGCAC CATTCCCTCG
GCCATCTGGC TGGGCTGGTT CTGGCGCCCG CTGCGCGGGC TGATGCTGGT GGTGGCCGGG
CTGTCGCTGC TGGCCATCGG GCTCTACCAG GGGCCTGAAG GGGCGCAACT GGCGCGCTCG
GACACGGTGT TCGGCCTCAA GTACTTCCTG TCCAGCCAGT CGGCCATCCT CTGGATGAGC
ATGGTGTTCT TCATGAGCAC CGTCTTCTAC TGGATCGGCA TGTTTGCGCG GGGCGAGGGC
ACGGCGCTGT CGCTGCTGGG CTCGCGCCTG GCCTGGCTGG CCGTGACGCT GGCGCTGGTG
GGCACCATGG TGCGCTGGTA CGAGAGCTAT CTGATCGGCC CCGATGTGGG CCACATCCCG
GTCAGCAATC TCTATGAAGT GTTCGTCATG TTCTGCTGGA TGACGGCGCT TTTCTATCTC
TATTACGAAC AGCACTACGA CACGCGCGCC CTGGGCGGCT TCGTGATGCT GGTGGTCAGC
GCGGCCGTGG GCTTTTTGCT GTGGTACACG CTGGTGCGCG AGGCGCACGA GATCCAGCCG
CTGGTGCCGG CGCTCAAGAG CTGGTGGATG AAGCTGCACG TGCCGGCCAA CTTCATCGGC
TACGGCACCT TTGCGCTGGC AGCCATGGTC TCCTTTGCCT ACCTGATCAA GCAGCAGGCC
ACGGAGACCC GCTGGTACAA GCTTGCGCCG CTGTGGATGC TGGGTGTGGT GCTGTGCTTC
GAGCCCATCG TCTTCCGCCA GGGCGCGACC CAGAACGGCG GCAGCTACTG GATGGTCTAC
TTCGGCATCT CGGCGCTGAT CGTGGCCGGC ATCCTGCTGG CGCGCAAGCG CATCGCCGAG
CGCCTGCCCA GCTTCGAGCT GCTGGACGAT GTGATGTACA AATCCATCGC CGTGGGCTTT
GCCTTCTTCA CCATCGCCAC CGTGCTGGGC GCGCTGTGGG CGGCCGAGGC CTGGGGCGGC
TACTGGAGCT GGGACCCCAA GGAAACCTGG GCGCTGATCG TCTGGCTCAA CTACGCGGCC
TGGCTGCACA TGCGCCTGGT CAAGGGCCTG CGCGGCACGG TGTCCGCCTG GTGGGCGCTG
GGTGGACTGG CCATCACCAC CTTCGCCTTC CTGGGGGTGA ACATGTTCCT GTCGGGGCTG
CACAGCTACG GGGAGCTTTG A
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| Protein sequence | MNTATTTTTL TLNEGFFARR NWFDWVFAAL VAAGLLYALQ RYGEYMDVYE KCILVGTIPS
AIWLGWFWRP LRGLMLVVAG LSLLAIGLYQ GPEGAQLARS DTVFGLKYFL SSQSAILWMS
MVFFMSTVFY WIGMFARGEG TALSLLGSRL AWLAVTLALV GTMVRWYESY LIGPDVGHIP
VSNLYEVFVM FCWMTALFYL YYEQHYDTRA LGGFVMLVVS AAVGFLLWYT LVREAHEIQP
LVPALKSWWM KLHVPANFIG YGTFALAAMV SFAYLIKQQA TETRWYKLAP LWMLGVVLCF
EPIVFRQGAT QNGGSYWMVY FGISALIVAG ILLARKRIAE RLPSFELLDD VMYKSIAVGF
AFFTIATVLG ALWAAEAWGG YWSWDPKETW ALIVWLNYAA WLHMRLVKGL RGTVSAWWAL
GGLAITTFAF LGVNMFLSGL HSYGEL
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