Gene Daci_5586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5586 
Symbol 
ID5751206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6210578 
End bp6211558 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content65% 
IMG OID641300719 
Productputative sulfite oxidase subunit YedY 
Protein accessionYP_001566600 
Protein GI160901018 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.18066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCC GCTCCCACGA CAACGGCTTC CAACACCCGA AAGGCAGCGA GATCACGCCC 
CGGGCAGGCT ACCTCAAGCG CCGTGCCTGG CTGCAGTACC TGGCCGCAGG CTCGGCGGGC
GCGGCATTGC CCGGCTGGGC GGCGGGCGTG CAGCGCCCCG GCAAGCTGGC AGCACTGGCC
TCCGTGCCTT CCCAGGTAGT GGGCGCAAAC ACCATGGACC GTGTCACGGC CTATGCCGAT
GTGTCCCAGT ACAACAACTT CTATGAATTC GGGCTGGACA AGGACGATCC TGCCAAGAAC
GCCCACACGC TCAAGACCCG CCCCTGGACG GTGAAGATCG AGGGCCTGGT CCAGCAGCCG
CAGACGCTGG ACCTGGATGC GCTGCTCAAG CTCGCGCCAC AGGAAGAGCG CATCTACCGG
CTGCGCTGCG TGGAGGGCTG GTCCATGGTG ATTCCCTGGG TGGGCTATTC CCTGGCCGAG
CTGCTGCGCA AGGTGCAGCC GCTGGGCAGT GCCAAGTATG TGGAATTCGT GACCCTGGCC
GACAAGGCGC AGATGCCGGG CCTGCGCAGC GGCGTGCTGG ACTGGCCTTA CACCGAGGGG
CTGCGCCTTG ATGAAGCCAT GCACCCGCTG ACGCTGCTGG CCTTTGGCAT GTATGGCGAG
GTGCTGCCCA ACCAGAATGG CGCGCCCGTG CGGCTGGTCG TGCCGTGGAA GTACGGCTTC
AAGAGCGCCA AGAGCATCGT CGCCATCCGC CTGACCGACA AGGAGCCGGG CACGGCCTGG
AACAAGGCGG CGCGCAACGA GTATGGCTTT TATTCCAATG TGAACCCCGA CGTGCCGCAC
CCGCGCTGGA GCCAGGCCAC GGAGCGGCGC ATTGGCGAAG ACGGCTTGTT CGCCAAGAAG
CGCAAGACGC AGCTGTTCAA TGGCTACGAA GCCCAGGTGG GCCAGCTCTA CGCGGGCATG
GACCTCAAGA AGTTCTATTG A
 
Protein sequence
MLIRSHDNGF QHPKGSEITP RAGYLKRRAW LQYLAAGSAG AALPGWAAGV QRPGKLAALA 
SVPSQVVGAN TMDRVTAYAD VSQYNNFYEF GLDKDDPAKN AHTLKTRPWT VKIEGLVQQP
QTLDLDALLK LAPQEERIYR LRCVEGWSMV IPWVGYSLAE LLRKVQPLGS AKYVEFVTLA
DKAQMPGLRS GVLDWPYTEG LRLDEAMHPL TLLAFGMYGE VLPNQNGAPV RLVVPWKYGF
KSAKSIVAIR LTDKEPGTAW NKAARNEYGF YSNVNPDVPH PRWSQATERR IGEDGLFAKK
RKTQLFNGYE AQVGQLYAGM DLKKFY