Gene Daci_5584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5584 
Symbol 
ID5751204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6209120 
End bp6209947 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content64% 
IMG OID641300717 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001566598 
Protein GI160901016 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTAG AGCTCTACCG AGACAAAAAC CACGCCTGCC TGATGTTCAC CGACCTCATC 
GAGGAAGATG GACAGGCCAT ACAGGCCAAT CAGTTCCTCA TCGTCGATGA CGACACGGGC
GCCATCATCG ACCCGGGCGG CAATCTCGCA TTCAACGAGC TGTTCATGGG CATGTCGCGG
CATTTCGCGC CGCACAAGCT GTCCTATCTG ATCGCTTCCC ACGCCGATCC CGACATCATT
GCCTCGCTGG ACCGCTGGAT GACCAGCACC AAGGCACAGC TGGTGATCTC GCGCATCTGG
GAGCGCTTCG CGCCCCACTT CACCAAGGTC GGCAAGACCG AAAACCGCGT GATCGGCGTG
CCGGACGCCG GCGGCCGGCT GCCGCTGGGC CGCCATGAAC TGCACCTGCT GCCCGCCCAC
TTCCTGCATG CCGAAGGCAA CTTCCACTTC TACGACCCGG TCAGCCGCAT CCTCTTCACG
GGCGATCTGG GCGTGTCCCT GATGAATGGC ATCGAGGCGC AGGTGCCCGT GACCGACCTC
GTGCCGCACA TCGCCCGCAT GGAAGGTTTT CACCGCCGAT ACATGGTCTC CAACAAGATC
CTGCGGCTGT GGGTGCAGAT GGCGCGCCAG CTGCCCATCG ACATGATCGT GCCCCAGCAC
GGCGCGCCCA TCATGGGCGC CAAGGCGATT GCCGACCTGT TCAACTGGCT CGAAGGACTG
CAGTGCGGCA TCGACCTGTT CGACCAGCGC AACTACCAGC TGCCCATGGC GGACATCGAC
CCCGTGACCC GCCAGCTGCG CCCTGCCCTG CGCGCCGTGG CCGGCTAG
 
Protein sequence
MPVELYRDKN HACLMFTDLI EEDGQAIQAN QFLIVDDDTG AIIDPGGNLA FNELFMGMSR 
HFAPHKLSYL IASHADPDII ASLDRWMTST KAQLVISRIW ERFAPHFTKV GKTENRVIGV
PDAGGRLPLG RHELHLLPAH FLHAEGNFHF YDPVSRILFT GDLGVSLMNG IEAQVPVTDL
VPHIARMEGF HRRYMVSNKI LRLWVQMARQ LPIDMIVPQH GAPIMGAKAI ADLFNWLEGL
QCGIDLFDQR NYQLPMADID PVTRQLRPAL RAVAG