| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5581 |
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| Symbol | |
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| ID | 5751201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6204541 |
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| End bp | 6205620 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641300714 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_001566595 |
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| Protein GI | 160901013 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.940333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTGCTA TGGGATCCTT ATTCAGTCGC CAGCCCGCAC CTTTGCTAGG CATCGACATC
AGTTCTTCGA GCGCCAAGCT CGTTGAGTTG TCTCGTGCCA AGTCGGGCGA ACTGTTGCTG
GAGCGCTGTG CCATCGAACC GCTGGAGCGG GGATGGATCA CTGACGGCAA CATCGAAAAG
TTCGATGAAG TGGCAGAGGC TGTACGGCGA CTGGTCAAAA AAAGCGGCAC GCGGACCAAG
AACGTGGCCA TGGCCTTGCC GGCCTCGGCC GTGATCACCA AGAAGATTTC GCTGCCGGAC
GGCATGAGCG AGCAGGAACT GGAGGTCCAG GTCGAATCCG AGGCCAATCA GTACATTCCT
TTCTCGCTCG ATGAAGTGAG CCTGGACTTC TGTGTCATAG GCCCGTCATC GAATTCACCC
GGCGACGTGG ACGTGCTCAT TGCCGCATCG CGCCGCGAGA AGGTCCAGGA CCGCCAGGGC
TTGGCCGAGG CGGCCGGCCT CAGGCCGACG GTCATCGACA TCGAGCCCCA CGCCTCCCGC
ATGGCGGCTG CACGGCTGAT CGAGCGCCTG CCCAATCAGG GCAACAACGC CCTTGTGGCC
TTGTTCGAGT TGGGCGCCAT GACGACCAGC ATGCAGATCC TGCGCGACGA CGAGGTGCTG
TATGACCGGG ACCAGGCCTT TGGCGGCGCA CAGCTGACGC AACTGATCGC GCGCCAATAT
GGTTTCTCGC TCGAAGAGGC CGAGTCAAAG AAGCGCAGCG GCGAACTTCC GGAGGACTAC
GCGTCCGCTG TGCTCAAGCC CTTTGTGCAA AGCATGACGC AGGAAGTGTC GCGCGCACTG
CAGTTCTTTT TCACCAGTAC GCCCCACAAC CGCATAGACC ACATCCTGCT GGCAGGCGGC
TCGGCCCCAC TTTCCGGCCT GTCCGAGGCC ATCACGCAGC AAACGGGTTT TGCCTGCAGC
CTTGCCAATC CCTTTGATGG AATGGAAGTC GGCAGCGGCG TACGCCTCAA GCGCATGTCG
CGCGAGGCCC CCGCCTACCT GACCGCCTGC GGACTGGCCA TGCGGAGGTT TGTGTCGTGA
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| Protein sequence | MIAMGSLFSR QPAPLLGIDI SSSSAKLVEL SRAKSGELLL ERCAIEPLER GWITDGNIEK
FDEVAEAVRR LVKKSGTRTK NVAMALPASA VITKKISLPD GMSEQELEVQ VESEANQYIP
FSLDEVSLDF CVIGPSSNSP GDVDVLIAAS RREKVQDRQG LAEAAGLRPT VIDIEPHASR
MAAARLIERL PNQGNNALVA LFELGAMTTS MQILRDDEVL YDRDQAFGGA QLTQLIARQY
GFSLEEAESK KRSGELPEDY ASAVLKPFVQ SMTQEVSRAL QFFFTSTPHN RIDHILLAGG
SAPLSGLSEA ITQQTGFACS LANPFDGMEV GSGVRLKRMS REAPAYLTAC GLAMRRFVS
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