| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5580 |
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| Symbol | |
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| ID | 5751200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6203933 |
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| End bp | 6204544 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641300713 |
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| Product | fimbrial assembly family protein |
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| Protein accession | YP_001566594 |
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| Protein GI | 160901012 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3166] Tfp pilus assembly protein PilN |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.676622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCTGA TCAATCTGCT TCCGCACAGA GAAGCAACAC GCAAGCGTCG CAAGGAAGCA
TTCCAGGCCA CCATGGTCCT GTCGGCCCTG GTGGGGCTTT TGATCATTGG CGCGGTGTAC
TGGTGGTACC AGATGATGAT CGAGGCCCAG CAGGCAAAGA ACAGCATGCT GCGCGCCGAG
ATCACCGTGC TGGAGTCCCA GATCAAAGAA ATTGCCGGGC TGGAGGATGA GATCACGGCC
CTGCGTGCAC GTCAGAAGGC CGTGGAGGAT CTGCAGTCCG ACCGCAATCT TCCGGTGCAC
ATGCTCAACG AGCTGGTGGC CCAACTGCCC GATGGTGTCT ACCTCAGCAG TATCAAGCAG
GAAGGTCTGG TCGTTACCAT GCAGGGCACG GCACAGTCCA ATGAGCGGGT GTCCGAAATG
CTGCGCAATC TCTCGGAGGG GACGCCCTGG ATTTCCAAGC CTGAACTGGC GGAAATCGTG
GCCAAGACGG TCAACGTCAC GCCCAAGGAC CAGCGTCGCG CCGCTGCGTT CAATCTGCGC
TTTCAACTGA CGCGCGCCAG CGTGGCGGAG AAGAGCCTTT CGACGGCGGC CAACCCAGGA
AAGTCCCAGT GA
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| Protein sequence | MILINLLPHR EATRKRRKEA FQATMVLSAL VGLLIIGAVY WWYQMMIEAQ QAKNSMLRAE
ITVLESQIKE IAGLEDEITA LRARQKAVED LQSDRNLPVH MLNELVAQLP DGVYLSSIKQ
EGLVVTMQGT AQSNERVSEM LRNLSEGTPW ISKPELAEIV AKTVNVTPKD QRRAAAFNLR
FQLTRASVAE KSLSTAANPG KSQ
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