| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5579 |
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| Symbol | |
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| ID | 5751199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6203256 |
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| End bp | 6203933 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641300712 |
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| Product | pilus assembly protein PilO |
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| Protein accession | YP_001566593 |
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| Protein GI | 160901011 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3167] Tfp pilus assembly protein PilO |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.697556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGA AGAAAAAGAA CGACATCGAC TTCTCCGCAC TGCAGGAGAA CATCCAACGC
CAGTTTCGTG GTCTGGATCC CAATGATCCT TCTCGGTGGC CTGTACTGCC GCGGACATTG
TTGTGCGTGG CCATCGCGCT GGCTGTGGCT GCCGTGCTGT GGTATGTGCT GATCAAGGAC
TATGAAGACA CCCTGGAGCA GGAGCGCAAT ACCGAAGTCA CGCTGCGCCA GGACTTCAGC
CAGAAGCTGT CCAAGGCCGT CAGCCTTGAT GGCCTGAAGA AGCAGCGTGA ACAGGTCCAG
CAGTATGTGA CGCAACTGGA AAAGCAATTG CCCAGCAAGG CGGAAATGGC GGCGCTGCTC
TCGGATATCA ATCAAGCAGG GCTGGGCCGC AGCCTGCAGT TTGAAACCTT CCGGCCTGGT
GCGATGGTGG TCAAGGAGTA CTACGCCGAG TTGCCCATTG CTTTGAAGGT GACTGGTCGC
TTTCACGACA TCGGATCATT CGCCTCCGAT GTGGCCTACC TGTCGCGCAT CGTGACCTTG
AACAATCTGT CGATCGCACC TGTAGGCAAG GAGGGAGGCG AGGTCCTGAG CATGGAGGCG
ACGGCACGAA CCTTCCGCTA CCTGGATGCA GATGAGGTGC AGGCGCAACG CGCAGCGGCC
GGGAAGGGCA AGAAATAA
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| Protein sequence | MAKKKKNDID FSALQENIQR QFRGLDPNDP SRWPVLPRTL LCVAIALAVA AVLWYVLIKD
YEDTLEQERN TEVTLRQDFS QKLSKAVSLD GLKKQREQVQ QYVTQLEKQL PSKAEMAALL
SDINQAGLGR SLQFETFRPG AMVVKEYYAE LPIALKVTGR FHDIGSFASD VAYLSRIVTL
NNLSIAPVGK EGGEVLSMEA TARTFRYLDA DEVQAQRAAA GKGKK
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