Gene Daci_5576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5576 
Symbol 
ID5751196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6198930 
End bp6200537 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content52% 
IMG OID641300709 
Producthypothetical protein 
Protein accessionYP_001566590 
Protein GI160901008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.101145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.740819 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCTTGCTGAC AATGTTGGCG TCATGCGCGC TAGTCGCTTG TGGTGGCGGT 
GGTGGAAATC CAGGAACTCC TGGCAACGGT ACGGGCGGAA CGACGCCTGA TGTAGCCAGT
GTAGAATTCC TGCTGGATAA GACTGTTATC GCAAACTCGG GAAGCGATGC AGCAACGATT
ACAGTGACTG CGCTGTCTGC CAGTAGAAAT CCTGTGGCGA ATGCGCCCGT CTCTGTGGTT
TTGTCTTCAG GCGTTTTTAC ACCTACTTCC AATGTGACGG ATGCATCAGG TCGAATGACT
GGAAAAATCG AGATTGGTGG CGATCGTTCC AATAGAGATA TTCGATTTGA TCTCAAGGCC
GGTGCTCAGG CTGGTGCGGG TGTCGTTGCA GTCACCGGCA GTCAGATTGC ATTGACCGTA
GTTCCTTCTG CTCCAACCCC AGGACAGCCA GTGGAGGTGA CGGCAAAAGT TGCAGATGTC
AATGGGGCTG GAATTTCAGG AATTCCCGTT GTCCTCTCGG GATCTGTTCT CAGCGCAGCA
ATTACTGCCC AGACTGATAC GTCGGGTGTG GCGAAGTTTT CTGCGTTTAA CGCGCCTGGT
GCTGCTCAGG TCTATTCTTT GCAAGCAAAG GCTTCGGGAG TGATTTCCAA TGAGCAGATC
ACTGTTGCAG GCGGAGCTAC CCAGGTGCCT GATGCTGTAG GCATTGTCAG CGCGGCAAGC
CTTTCTATAG TGCCGAATAC GGTTAAGCCG AATCTGGATG GTGGCCGAAC CAATATGGCG
CAGTTGCGTG CATTGTTCCT GGATAAAGAT AATCGTGCGA TTCCAAATAT GCGAGTGCGT
TTTGAGATCG TACCGCCTGG CCTGGGTTCT GGTGAATCTA TTTCGACAGG AAGTCAGTCG
GTTATTTCTA ACGCAAGTGG TGTTGCCTTG GCCCAATATA TCCCAGGTAC ACGGGTTAGC
CCGACCGATG GCGTTAATGT AAGGATGTGC TACGGCCCTT CTGATGCATC TCTGTCCAGC
GGTAAGTGCC CCGATTTCCG CGTTGGCACA TTGACTGTGG CAAGTGAGCC AGTTTCCATC
ACTATTGGTG ATAACAACGA GCTTGAAAAA GGCGCCAACA ATCTTACTTA TATCAAGAAG
TTTGACGTTG CCGTCGCCAA CGCGGCCGGT GAAGCGGTTT CGGATGCGGA TGTGTCGGTC
AGCGTAGATA TTCTGCGTTA CGGTTTTGGC CGGTATGACA ATGTCAAGAA TTCACATACC
GATGGATCCG GTTTCTGCTT GAATGAAGAT GTCAATCGCA ATGGTAATTT GGACAACGGT
GAAGATGCCA ATGGAGATGG CCGGTTGACT CCTCCAAAGG CGGATATTGT GGTTTCTTAT
TTCAATGGCC GTAAAACGGG AACCAATGGC CGCGTAATCG TGCAGGCGGA ATATCCGCAG
AACGTAGCCA CTTGGCTGCT GTACAAGCTG ACCGTCAGCT CCAATGCTGC CGGCTCCGAA
GGTCGTGCCG AGCGCATCTT CCTTACCTCG TTCGTCGAAG GTGACCAGAA GAACGGCTCC
TTCCTGACCT CGCCTTACGG AGTGACATCC GTCTGCCTGC CCGAGTGA
 
Protein sequence
MKKILLTMLA SCALVACGGG GGNPGTPGNG TGGTTPDVAS VEFLLDKTVI ANSGSDAATI 
TVTALSASRN PVANAPVSVV LSSGVFTPTS NVTDASGRMT GKIEIGGDRS NRDIRFDLKA
GAQAGAGVVA VTGSQIALTV VPSAPTPGQP VEVTAKVADV NGAGISGIPV VLSGSVLSAA
ITAQTDTSGV AKFSAFNAPG AAQVYSLQAK ASGVISNEQI TVAGGATQVP DAVGIVSAAS
LSIVPNTVKP NLDGGRTNMA QLRALFLDKD NRAIPNMRVR FEIVPPGLGS GESISTGSQS
VISNASGVAL AQYIPGTRVS PTDGVNVRMC YGPSDASLSS GKCPDFRVGT LTVASEPVSI
TIGDNNELEK GANNLTYIKK FDVAVANAAG EAVSDADVSV SVDILRYGFG RYDNVKNSHT
DGSGFCLNED VNRNGNLDNG EDANGDGRLT PPKADIVVSY FNGRKTGTNG RVIVQAEYPQ
NVATWLLYKL TVSSNAAGSE GRAERIFLTS FVEGDQKNGS FLTSPYGVTS VCLPE