Gene Daci_5567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5567 
Symbol 
ID5751187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6188177 
End bp6189733 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content66% 
IMG OID641300700 
Productalkaline phosphatase 
Protein accessionYP_001566581 
Protein GI160900999 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1785] Alkaline phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.495635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACG CTGCAATCAA GGCACTCAAG GAATTCCACA TGCATCCGAT CCTCCAAAAG 
ACCTCCCTCG CCCTGGCTGC GGCCGGCGCG CTGGCGCTGC TGGCACCTGC CGCCCATGCG
GCTGGCGAGG CCAAGAACGT CATCTTCTTC CTCGGCGACG GCATGGGCCC GGTCACCGTG
ACCGCCGCGC GCATCTACAA GGGCGAGAAG CAGCTGGCTG CCAATCCCAC GGCACTGACC
AGCAGCGAGC GCGCCACGCT GACCATGCAG TCCCTGCCTT ACGCCAGCCG CGTCAAGACC
TTCTCGCGCG ATGGCCAGAC CACGGACAGC GCGCCTTCGA TGGCGGCCTA CATGACCGGC
GTGAAGATGA ACAACGAAGT CATCTCCATG TCGGCCGAGA CCCTGGCCTA TGCGGCCAAC
GGCCAGCAGT ACATCAACGG CGAGGACACC ACCTGCCCGG CCGGCAACGG CCAGCCCGCG
CAGACCCTGC TGGAGCTGTC CAAGGCCAAG GGTCGCGCCG TGGGCGCCAT CTCCACCACG
CGCGTGGGCC ATGCGACGCC TGCGGCCACC TACGCCCACA TCTGCAACCG CAATGGCTAC
AACAGCATTG CCGAGCAGTC CGTGCCCGGC CATGCCAACT ACAACGCCAG GCTGGGCGAC
GGCATCGACG TGCTCATGGG CGGCGGCCAG CGCAACTACC TGCCCAAGTC GGTCAACCCC
AGCAGCAAGC GCACGGACAC GGCCAACCTC GTGGACATGA TGAAGGCCAA GGGCTACGCC
TATGTTGCCA AGGGCAGCGA GCTGGCGGCC CTGGACGCGA CCAAGGCCCC CAAGCTGCTG
GGCCTGTTCA CGCAAAGCGA AATGGCCTAC GAGCTGGACC GCGTCAAGCA AAAGCTGGAT
GAGCCCAGCC TGGCCGACAT GACCGGCAAG GCGCTGGACG TGCTCAGCCG CAATGACAAG
GGCTTCTTCC TGATGGTGGA AGGCGGCCGC ATCGACCACG CACTGCACGG CACCAATGCC
AAGCGCGCGC TGGAGGACAC GCTGGCCTTC GACCGCGCCA TCGAGACCGC CATGGCCTAC
ATGGAAAAGA AGGACCCGGG CCTGAAGAAC ACGCTGATCG TCGTCACGGC CGATCACGAC
CACAACATGG TGTTCAACGG CTACTCCAAG ATCGGCAATC CCATCCTGGG CAAGGTGCAG
GACTACCAGA CCGGCCAGAT GGCCAAGGCC CAGGACGGCA AGCCCTACAC CACGCTGGCC
TTCGGCAACG GCGGACGTCC CAACGCCACG GCATCCAGCC AGGTCAATGC CGAAGATGGC
AACAAGCCCT GGATCGCTCC CACGCGCGGC GCCTCGCGCG ACGACGTGAC GGCCGTGGAC
ACCACGGACG ACAACTACCT GCAGGAAGTC GGCCTGAACC TGGGCACGCC GGGCTCGGAG
ACCCATGGCG GCGGCGACGT GATGCTGTTC GCCGGCGGCG CGGGCGCCAA GATCTTCAAG
GGCACGATGG ACAACACCAA GGTGTTCTCC AAGGTCCGCG AAGCCGCTGG CCTGTAA
 
Protein sequence
MPHAAIKALK EFHMHPILQK TSLALAAAGA LALLAPAAHA AGEAKNVIFF LGDGMGPVTV 
TAARIYKGEK QLAANPTALT SSERATLTMQ SLPYASRVKT FSRDGQTTDS APSMAAYMTG
VKMNNEVISM SAETLAYAAN GQQYINGEDT TCPAGNGQPA QTLLELSKAK GRAVGAISTT
RVGHATPAAT YAHICNRNGY NSIAEQSVPG HANYNARLGD GIDVLMGGGQ RNYLPKSVNP
SSKRTDTANL VDMMKAKGYA YVAKGSELAA LDATKAPKLL GLFTQSEMAY ELDRVKQKLD
EPSLADMTGK ALDVLSRNDK GFFLMVEGGR IDHALHGTNA KRALEDTLAF DRAIETAMAY
MEKKDPGLKN TLIVVTADHD HNMVFNGYSK IGNPILGKVQ DYQTGQMAKA QDGKPYTTLA
FGNGGRPNAT ASSQVNAEDG NKPWIAPTRG ASRDDVTAVD TTDDNYLQEV GLNLGTPGSE
THGGGDVMLF AGGAGAKIFK GTMDNTKVFS KVREAAGL