| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5560 |
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| Symbol | |
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| ID | 5751180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6181558 |
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| End bp | 6182442 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300693 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_001566574 |
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| Protein GI | 160900992 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.15712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGTAT GTAGAACAAA AGTTCGCAGA AAGAATTATA GAGCCATGGA AAAAAATGCC
GCTTCCGTAA TTTCCACAGG TGGGGCCGAA GAAGAGGGCG GCACGCCGCG CCCCGGCGAC
AGCTATGTGC AGTCCTTTGC GCGCGGCCTG GGCGTGATCC GCTCGTTCAG CGCCGAGGCG
CCTGCGCAGA CGCTCAGCGA GGTGGCGGCG CGCACGGGGC TCACGCGCGC CGGGGCCCGG
CGCATCCTGC TGACGCTGCA GACGCTGGGC TATGTGAAGA GCGACGGCAA GCTGTTCCAG
CTCACCCCGC GCATCATGGA ACTGGGCTTT GCCTACCTCA GCTCCACCCC GGTCTGGAAT
CTCGCCGAGC CCGTGATGGA AAACCTGGTC GACGAGGTCA AGGAGTCCTG CTCGGCCGCC
GTGCTCGATG GGGGCGACAT CGTCTATGTG CTGCGCGTGC ACACCCACAA GATCATGAGC
ACCAACCTCG GCGTTGGCTC GCGCCTGCCG GCCTGCTGGA CCTCGATGGG GCGCGTGCTG
CTGGCCGGCG AGAGCGATGA ATCCCTGCAG GCCCTGCTGG ATGCGCGCGA GCGCCGGCAG
TTCACGGCCC TGACCGAGCA GGACGACGAG CGCCTTCGCC AGCGCATTCT GGAGGTGCGC
GCCCAGGGCT GGGCCCTGGT GGACCAGGAA CTGGCCGAAG GCCTGATCTC CATCGCGGCG
CCCGTGAAGA ACGCGGCCGG GCGCACCGTG GCCGCGCTCA ACATCAGCGG CCAGGCCAAC
CGCAACAGCG CCGAGATGAT GCGCGGGCAA CTCCTGCCCC GGCTGCTGGC CGCCACGCAG
CTGGTGAGCC AATTGCTCAG GGCCTCATCG CGGCTTTCCC TGTAG
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| Protein sequence | MFVCRTKVRR KNYRAMEKNA ASVISTGGAE EEGGTPRPGD SYVQSFARGL GVIRSFSAEA
PAQTLSEVAA RTGLTRAGAR RILLTLQTLG YVKSDGKLFQ LTPRIMELGF AYLSSTPVWN
LAEPVMENLV DEVKESCSAA VLDGGDIVYV LRVHTHKIMS TNLGVGSRLP ACWTSMGRVL
LAGESDESLQ ALLDARERRQ FTALTEQDDE RLRQRILEVR AQGWALVDQE LAEGLISIAA
PVKNAAGRTV AALNISGQAN RNSAEMMRGQ LLPRLLAATQ LVSQLLRASS RLSL
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