Gene Daci_5559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5559 
Symbol 
ID5751179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6180792 
End bp6181502 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content69% 
IMG OID641300692 
Producthypothetical protein 
Protein accessionYP_001566573 
Protein GI160900991 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.316618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC TGCCCCGACT CACCCTTGCG GATCTGCCGC ACCACATCAT CCAGCTCGGC 
AACAACGGCG GGGACATCTT CATCGATGCC CAGGACCGGG AAACCATGCT GGGGCTGCTG
CGCGAGATGG CGCGCAGCTG CGAGCTGGCC GTGCATGCCT ACGTGCTGCT GCCCAGCCAG
TTCCACCTGC TGGCCACGCC CCGCACCGGC GATGGCCTGC CCAAGTTCAT GCAGGCCGTG
GGCCGGCGCT ATGTGCGCTA CTTCAACGAC CGACACGGCC GCAGCGGCAC GCTGTGGGAA
GGCCGCTATC GCGGCACGGT GCTGCAGCCC AGCTGGCTGC TGCCCACCAT GGTCTTCATG
GACGACAGCC CCGTGCGCGC CGGCCTGGTC CAGCGGCCGG CCGACTGGCC CTGGTCCAGC
TACGCGCACA ACGCCGGACT GCGCAGCGAC GCGCTGATCC AGCCGCATGC CGTGTTCTGG
GAGCTGGGCA ACACCCCGTT TGCGCGGGAT GCGGCCTATG TGGAAGCCGT GGAAGAGGGG
GTTGGCACCG ATGACGCCGA GCGCATCAGC CAGTCGGCGC TGCGGGGCTG GGCGCTGGGC
GATGAGCAAT TCATTGCCGA TTTACAACAG CGCACCGAGC GCCGTGTGAC CCGCCAGCGC
GCCGGCCGTC CGCCCGGACG GACCAATGAG CGCACCACAA CAGTGCGTTA G
 
Protein sequence
MARLPRLTLA DLPHHIIQLG NNGGDIFIDA QDRETMLGLL REMARSCELA VHAYVLLPSQ 
FHLLATPRTG DGLPKFMQAV GRRYVRYFND RHGRSGTLWE GRYRGTVLQP SWLLPTMVFM
DDSPVRAGLV QRPADWPWSS YAHNAGLRSD ALIQPHAVFW ELGNTPFARD AAYVEAVEEG
VGTDDAERIS QSALRGWALG DEQFIADLQQ RTERRVTRQR AGRPPGRTNE RTTTVR