| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5557 |
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| Symbol | gltD |
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| ID | 5751177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6174244 |
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| End bp | 6175719 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300690 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001566571 |
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| Protein GI | 160900989 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.536283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGA CCACCGGCTT CATGGAATAT GAACGCCTCG AGGAGGGCTA CGCGCCCGTC
GCCGAGCGCG TGAAGCACTA CAAGGAATTC GTCATCGGCC TCGATGACAG CCAGGCCAAG
ATCCAGGGCG CGCGCTGCAT GGACTGCGGC ACGCCGTTCT GCAACAGCGG CTGCCCGGTC
AACAACATCA TTCCGGACTT CAACGACCTG GTCTTCCACG GCGGCTGGAA GAGCGCCAGC
GCCGTGCTGC ACAGCACCAA CAACTTCCCC GAGTTCACCG GCCGCATCTG CCCCGCGCCC
TGCGAGGCCG CCTGCACCCT GAACATCAAC GACGACGCCG TGGGCATCAA GTCCATCGAG
CACGCCATCA TCGACCGTGC CTGGGCCGAA GGCTGGGTCA AGCCGCTGCC CAGCAGCCGC
AAGACCGGCA AGAAGGTCGC CGTGGTCGGC GCAGGCCCCG CAGGCCTGGC CGCATCGCAG
CAACTGGCCC GCGCCGGCCA CGATGTCACG CTGTTCGAGA AGAACGACCG CGTGGGCGGC
CTGCTGCGCT ACGGTATTCC CGACTTCAAG ATGGAGAAGT CGCACATCGA CCGCCGCGTC
GAGCAGCTCG TGGCCGAAGG CGTCAAGATC CGTACCGGCG TGCTGGTGGC GGGCAAGGAC
GGCCTGGGCG AAGACTCCAA GGTCACCAAC TGGGCCAAGG AAACCGTCAG CCCCGAGCAG
CTCATGGCCG AGTTCGACGC CGTGCTGCTG ACCGGCGGTG CCGAGCAGTC GCGCGACCTG
CCCGTGCCGG GCCGTGAACT CAAGGGCATC CATTTCGCCA TGGAGTTCCT GCCGCAGCAA
AACAAGGTCA ACGCCGGCGA CAAGCTCAAG GGCCAGCTGC GGGCCGATGG CAAGCACGTC
ATCGTCATCG GTGGCGGCGA CACCGGCTCA GACTGCGTGG GCACCAGCAA CCGCCACGGC
GCCGTCAGCG TGACCCAGTT CGAGCTGATG CCCATGCCGC CCGAGCAGGA GAACAAGCCC
CTGGTCTGGC CCTACTGGCC GATCAAGCTG CGCACCAGCT CCAGCCACGA GGAAGGCTGC
GAGCGCGAGT TCGCCATCGC CACCAAGGAG TTCATCGGCG AGAAGGGCCA GGTCACGGCC
GTCAAGACCG TGCGCATCGA GATGAAGGAC GGCAAGATGG TCGAGGTGCC CGGCAGCGAG
CAGGTGCTCA AGGCCGACCT GGTGCTGCTG GCCATGGGCT TCGTCAGCCC CGTGCAGGCC
GTGCTCGACG CCTTTGGCGT GGACAAGGAC GCACGCGGCA ATGCCAAGGC CACCACCGAC
TTCACGGGCG GCTACGCCAC CAGCGTGCCC AAGCTGTTCG CCGCCGGCGA CGTGCGCCGC
GGCCAGTCCC TGGTGGTCTG GGCCATCCGC GAAGGCCGCC AGGCCGCTCG CTCCATCGAC
GAGTTCCTCA TGGGCACGTC CGACCTGCCT CGGTGA
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| Protein sequence | MGKTTGFMEY ERLEEGYAPV AERVKHYKEF VIGLDDSQAK IQGARCMDCG TPFCNSGCPV
NNIIPDFNDL VFHGGWKSAS AVLHSTNNFP EFTGRICPAP CEAACTLNIN DDAVGIKSIE
HAIIDRAWAE GWVKPLPSSR KTGKKVAVVG AGPAGLAASQ QLARAGHDVT LFEKNDRVGG
LLRYGIPDFK MEKSHIDRRV EQLVAEGVKI RTGVLVAGKD GLGEDSKVTN WAKETVSPEQ
LMAEFDAVLL TGGAEQSRDL PVPGRELKGI HFAMEFLPQQ NKVNAGDKLK GQLRADGKHV
IVIGGGDTGS DCVGTSNRHG AVSVTQFELM PMPPEQENKP LVWPYWPIKL RTSSSHEEGC
EREFAIATKE FIGEKGQVTA VKTVRIEMKD GKMVEVPGSE QVLKADLVLL AMGFVSPVQA
VLDAFGVDKD ARGNAKATTD FTGGYATSVP KLFAAGDVRR GQSLVVWAIR EGRQAARSID
EFLMGTSDLP R
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