Gene Daci_5553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5553 
Symbol 
ID5751173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6171743 
End bp6172105 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content67% 
IMG OID641300686 
Producthistidine triad (HIT) protein 
Protein accessionYP_001566567 
Protein GI160900985 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.555493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACC ACGACCCGAA CTGCCTGTTT TGCCGCATCA CCAAAGGCGA GATCCCTTCC 
CGCAAGGTCT ATGAGGACGA AGACGTCTTC GCATTCCACG ACATCCATCC CGGCGCGCCC
ATCCACTTCC TGATGGTGCC CAAGAAGCAC ATCCCCTCCA TGGCCCAGGT CCAGGCCGAG
GACGCCCCGC TGCTGGGCCG CCTGATGGCG CTGGCGCCCC GCCTGGCCGC CGAGCAAGGC
TGCAACCCGT ATCCCGACGG CGGCTTTCGC CTGGTGGTCA ACACGGGCAC CGAAGGCGGC
CAGGAAGTCC ACCACCTGCA CATCCACGTC ATGGGCGGCC CCCGCCCCTG GCTCAAGGGC
TGA
 
Protein sequence
MHDHDPNCLF CRITKGEIPS RKVYEDEDVF AFHDIHPGAP IHFLMVPKKH IPSMAQVQAE 
DAPLLGRLMA LAPRLAAEQG CNPYPDGGFR LVVNTGTEGG QEVHHLHIHV MGGPRPWLKG