Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5553 |
Symbol | |
ID | 5751173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6171743 |
End bp | 6172105 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641300686 |
Product | histidine triad (HIT) protein |
Protein accession | YP_001566567 |
Protein GI | 160900985 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.555493 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGACC ACGACCCGAA CTGCCTGTTT TGCCGCATCA CCAAAGGCGA GATCCCTTCC CGCAAGGTCT ATGAGGACGA AGACGTCTTC GCATTCCACG ACATCCATCC CGGCGCGCCC ATCCACTTCC TGATGGTGCC CAAGAAGCAC ATCCCCTCCA TGGCCCAGGT CCAGGCCGAG GACGCCCCGC TGCTGGGCCG CCTGATGGCG CTGGCGCCCC GCCTGGCCGC CGAGCAAGGC TGCAACCCGT ATCCCGACGG CGGCTTTCGC CTGGTGGTCA ACACGGGCAC CGAAGGCGGC CAGGAAGTCC ACCACCTGCA CATCCACGTC ATGGGCGGCC CCCGCCCCTG GCTCAAGGGC TGA
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Protein sequence | MHDHDPNCLF CRITKGEIPS RKVYEDEDVF AFHDIHPGAP IHFLMVPKKH IPSMAQVQAE DAPLLGRLMA LAPRLAAEQG CNPYPDGGFR LVVNTGTEGG QEVHHLHIHV MGGPRPWLKG
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