| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5552 |
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| Symbol | |
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| ID | 5751172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 6170670 |
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| End bp | 6171701 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641300685 |
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| Product | patatin |
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| Protein accession | YP_001566566 |
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| Protein GI | 160900984 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.231044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCGA CCCCGACCTG CAAGATCAAC CTCGCCCTGC AGGGCGGGGG CTCGCACGGC
GCCCTGACCT GGGGCGTGCT CGATGCGCTG CTGGAAGACG GCAGCCTTGT CTTCGACGGC
ATCAGCGGCA CCAGCGCCGG GGCCATGAAT GCAGTGGCCC TGGCCCAGGG CTTTGCCAAG
GCTGCACGCC AGGAAAGCGA TCCGGTGGCC GCCCAGGCGC TGGGGGCCGA GCTGGCCCGC
GCCACGCTGA CCGAACTGTG GGAAGGCGTG GGCACCATGG GCAGCCTGAT GTGGGGCGCG
CCCCTGCCGG GCAGCCCCTT CATGGGCGTG CTCAACCAGT TCTTCTCGCC CTACCAGACC
AACCCGCTGG ACATCAACCC GCTGCGCAAG CTGCTCGAAC GGGTCGTGGA TTTCGAGGCG
CTGACGCATC CGCCCATGGA AGGCGTGGTG CCCAAGGTCT TTGTCTGCGC CACCAATGTG
CGCACGGGCC GGGGCTGCAT CTTTTCGGGC AGAAAACTCA GTGCCGACGC GGTCATGGCC
TCGGCCTGCC TGCCCCAGCT GTTCAAGGCC GTGGAAATCG ACGGCGAGCC CTACTGGGAT
GGCGGTTTTT CGGGCAACCC GGCGCTGTAC CCGCTGATCT ACGGCACGGC GTCCAGCGAC
ATTCTGCTGG TGCAGATCAA CCCCATCGAG CACACCGATC TGCCCAACAC GGCGGCCGAC
ATCATGGACC GCATGAACGA GGTCACCTTC AACGCCGGCC TGCTGGCCGA GCTGCGCGCC
ATCGAGTTCG TCAAGCGCCT GCTCGAGCAG GGCAAGCTGG ACCCGACACG CTACAAAAAG
GTGCTGCTGC ACCGCGTGGA CGGCGGCTCC GTGCTCAAGG GCTATGGCGC CTCGACCAAG
ACGCGCTCCG ACATGCGCTT CGTGCGCGAG CTGTTCGAGC TCGGACGCGA GCAGGGCCAG
CAGTGGCTCC AGCAGCACCG CAGCGACATC GGCGTGCGCC AGACGCTGCG CATCAACGAC
AATCCGGCCT GA
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| Protein sequence | MTPTPTCKIN LALQGGGSHG ALTWGVLDAL LEDGSLVFDG ISGTSAGAMN AVALAQGFAK
AARQESDPVA AQALGAELAR ATLTELWEGV GTMGSLMWGA PLPGSPFMGV LNQFFSPYQT
NPLDINPLRK LLERVVDFEA LTHPPMEGVV PKVFVCATNV RTGRGCIFSG RKLSADAVMA
SACLPQLFKA VEIDGEPYWD GGFSGNPALY PLIYGTASSD ILLVQINPIE HTDLPNTAAD
IMDRMNEVTF NAGLLAELRA IEFVKRLLEQ GKLDPTRYKK VLLHRVDGGS VLKGYGASTK
TRSDMRFVRE LFELGREQGQ QWLQQHRSDI GVRQTLRIND NPA
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