| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5547 |
|---|
| Symbol | |
|---|
| ID | 5751167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6167321 |
|---|
| End bp | 6168331 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641300680 |
|---|
| Product | UDP-glucose 4-epimerase |
|---|
| Protein accession | YP_001566561 |
|---|
| Protein GI | 160900979 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1087] UDP-glucose 4-epimerase |
|---|
| TIGRFAM ID | [TIGR01179] UDP-glucose-4-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTGG TCACAGGCGG CGCCGGCTTC ATCGGCTCGC ATACCTGCGT GGAACTCGCC
GCTGCGGGCG AGCCCTACCT GATCTACGAC AACTTCAGCA ACAGCAGCCC CGATGTGCTC
GAACGCATGG AACGCATCAC GGGCCGGCGC CCGCTGTGCG TCGAGGGCGA CGTGCGCGAC
CGCGCCGCGC TGGACCGGCT GTTTGCCGAG CACTCCATCC GCGAGGTGAT CCACTTCGCC
GCGCTCAAGG CCGTGGGCGA GTCCGTGGCC CAGCCGCTGC GCTACTACGA ACACAACGTG
GGCGGCACGG TGGCCCTGCT GCAGGCCATG CGGATGGCGG GCGTGCGCAG CCTGGTGTTC
TCCTCCTCGG CCACGGTCTA CGGCGATCCG GCCAGCCTGC CGATCCGCGA AGACTTTCCG
CTGTCCGCCA CCAACCCCTA CGGTCGCAGC AAGCTGTGGA TCGAGGAAAT GCTGGCCGAT
CTGGACCGGG CCGAGCCCGG CCAGTGGAGC CTGGCACGGC TGCGCTACTT CAACCCCGTG
GGCGCCCATG AAAGCGGCCT GATCGGCGAG GACCCGCGCG ACATCCCCAA CAACCTCATG
CCCTATGTGT CGCAGGTCGC CATCGGCCAG CGCCAGCAGC TCAGTGTCTA TGGCGATGAC
TATGCGACGC CGGACGGCAC GGGCGTGCGC GACTACATCC ACGTCACCGA CCTGGCGCGC
GGCCACCTGG CGGCGCTGCG CTATCTGCGC GAGCAGCAGG GCCTGCTGAC CGTGAACCTG
GGCACGGGGC GCCCGGTCTC GGTGCTGGAG ATGGTCAAGG CCTTCGAGCG CGCCAGCGGC
CGTCCCGTGC CCTACCAGAT CGTGGCGCGC CGCCCCGGCG ACGTGGCCCA GTGCTGGGCC
GACCCCGCCG AGGCCGAGCG GCTGCTGGGC TGGAAGGCCA TGCTGGACCT GGACCGCATG
TGCGAGGACG CATGGCGCTG GCAAAGCCAG GCCGCAGGCC TCAAGCGCTG A
|
|---|
| Protein sequence | MILVTGGAGF IGSHTCVELA AAGEPYLIYD NFSNSSPDVL ERMERITGRR PLCVEGDVRD
RAALDRLFAE HSIREVIHFA ALKAVGESVA QPLRYYEHNV GGTVALLQAM RMAGVRSLVF
SSSATVYGDP ASLPIREDFP LSATNPYGRS KLWIEEMLAD LDRAEPGQWS LARLRYFNPV
GAHESGLIGE DPRDIPNNLM PYVSQVAIGQ RQQLSVYGDD YATPDGTGVR DYIHVTDLAR
GHLAALRYLR EQQGLLTVNL GTGRPVSVLE MVKAFERASG RPVPYQIVAR RPGDVAQCWA
DPAEAERLLG WKAMLDLDRM CEDAWRWQSQ AAGLKR
|
|---|
| |