Gene Daci_5544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5544 
Symbol 
ID5751164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6159875 
End bp6160426 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content70% 
IMG OID641300677 
Productputative lipoprotein 
Protein accessionYP_001566558 
Protein GI160900976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.615465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACC GCACCACTTT CGTCTCCCGC CTTCGCGTGC TCACGGGTAT TGCCCTTGTC 
GGCCTGCTGT CTGCCTGCTC GACCATCGAC CGGGGCACGG CGCCCGCGCT GGAGACGAAT
GCCAGCTGGG CGGTGCTGCC CTTCGAGAAC CACACCGAAA CGCCCATGGC CGGCAACCGC
GCAGCCGCCA TTGCCACGGC GCTGATCAAT GCGCGTGGCG TGGGCCAGGT CAAGCGCTAC
ACGGGCGATG CACTGCAGGA AACCCTGTTC GACGGCCGCG AAGCCAAGCG CCGCGATGAC
GCCCTGGCCT GGGCGCGCGG CGAAGGCGTG CGCTATGCGC TGACGGGCGC GGTGGACGAA
TGGCGCTACA AGGTGGGCGT GGATGGCGAG CCGGCCGTGG GCGTGACCTT GGAGATCGTG
GACGTGGGCA CCGGCGCCAC CGTGTGGAGC GGCGCGGGCG CGCAAAGCGG CTGGAGCCGC
GAGGCCCTGG CCGCCGTGGG CCAGAAGCTG ATCCGCAACC TGCTGGGCAC AGGCCTGGCC
AACGCCCGAT AA
 
Protein sequence
MTHRTTFVSR LRVLTGIALV GLLSACSTID RGTAPALETN ASWAVLPFEN HTETPMAGNR 
AAAIATALIN ARGVGQVKRY TGDALQETLF DGREAKRRDD ALAWARGEGV RYALTGAVDE
WRYKVGVDGE PAVGVTLEIV DVGTGATVWS GAGAQSGWSR EALAAVGQKL IRNLLGTGLA
NAR