Gene Daci_5541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5541 
Symbol 
ID5751161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6155904 
End bp6157460 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content67% 
IMG OID641300674 
Productglycosyl transferase group 1 
Protein accessionYP_001566555 
Protein GI160900973 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTG CGAGCCAGTT CCCCACGGCG GCCGATGCGG ACATCGCGCT GCTGCTGGAA 
GGCACTTTCC CCTATGTCAG CGGGGGTGTG TCCAGCTGGG TCAACCAGAT CCTGCAGGCC
TATCCCGAGC ACCGCTTTGC CATCGTCTTC CTGGGCAGCC GGCGCGAGGA CTATGGCGAT
TTCCGCTACG CACTGCCGCC CAACGTGGTG CACTTCGAGC AGCACTACCT GTTTGACGCG
CTGCACTCCA ATATCCAGCC CGCCCCTTCG CGCGGCCATC CCGAAGCCCT GGCCAAGGCC
CGGGAATTCC TGGGCGCGCT GGAGGCGCAT GACGGCAGTG CCGAAAGCCG GGCCAAGGTG
CTGGCGGCCA TGCGCTCCAT TGCGCTGGAG CTGCAGCCCG GCGGCAGCCT GCCGCTGGAG
GATTTCCTGC ACAGCGAATA CGCCTGGGAC CTGATCCGCG ACAGCTACCG GCGCCACTGC
ACCGACCCAT CGTTCGTGGA CTTCTTCTGG ACCGTGCGCA TCATGCTGCA GCCGCTGTGG
CTGATGGCGC GCATCGCCCA CGGGCTGATC CCGGTGCGCG TGCTGCATAC TGTCTCGACC
GGCTATGCGG GATTTCTGGG CGGCCTGCTG CACCATGCGC GCGGCCTGCC GCTGGTGCTG
TCCGAGCATG GCATCTACAC GAAAGAGCGC CAGATCGACC TGCTGCAAAG CTCCTGGATC
CGCGACAACC GCAACATCTT CCAGCGCGAC CCCATGGAGG TGTCGTTCTT CCGGCAGATG
TGGATACGGT TTTTCGACTG GATGGGGCGC TTTTGCTATG GCGCGGCCGA TCCCATCATT
GCGCTGTACG AGAGCAACCG CCTGCGCCAG GTGGCCGATG GCGCGGCCGC CGAGCGCACG
GTCAGCATCC CCAACGGCAT CCGCATAGAA CGCTTTGCGC CGCTGCGCAC CCAGCGGCCC
GCCGAGGTGC CGCCCGTGCT GTGCCTGATC GGCCGCGTGG TGCCCATCAA GGACATCAAG
ACCTTCATCC GCGCCATGCG CCGCGTGGTC AACCGGATGC CCCATGTCCA GGCCTGGGTG
GCCGGCCCCA CGGCCGAGGA CCCGGCCTAT GCCGATGAAT GCCAGAACCT CGTGGACAGC
CTGGGCCTGC AGGCCAACGT CCGCTTTCTG GGCATGCAGA AGGTGGAGGA GCTGCTGCCC
AAGGTGGGCG TGGTCGTGCT GTCTTCCATC AGCGAGGCGC TGCCCCTGGT GATCCTCGAA
GCCCAGGCCG CAGGCGTGCC CGTGGTCAGC ACCGACGTGG GTTCCTGCCG CCAGCTCATC
GACGGGCTGG AGCCGCAAGA CCAGGCCCTG GGCTCGTGCG GGCGCGTGGT CGGCATTGCC
AACCCCGAGG CGCTGGCCGA CGCCTGCCTG GAGCTGCTGA GCTCGCCCAC GCAGTGGCAG
GCCGCCAGCG CGGCCGGGAT TGCGCGCGTG GAGCGCTACT ACTCCGACCG GCTGCTGTTC
GAGCGCTACA GGCAGGTCTA TGACAGTGCG CTGCAACAGT CCGAGGAAAA ACACTGA
 
Protein sequence
MSRASQFPTA ADADIALLLE GTFPYVSGGV SSWVNQILQA YPEHRFAIVF LGSRREDYGD 
FRYALPPNVV HFEQHYLFDA LHSNIQPAPS RGHPEALAKA REFLGALEAH DGSAESRAKV
LAAMRSIALE LQPGGSLPLE DFLHSEYAWD LIRDSYRRHC TDPSFVDFFW TVRIMLQPLW
LMARIAHGLI PVRVLHTVST GYAGFLGGLL HHARGLPLVL SEHGIYTKER QIDLLQSSWI
RDNRNIFQRD PMEVSFFRQM WIRFFDWMGR FCYGAADPII ALYESNRLRQ VADGAAAERT
VSIPNGIRIE RFAPLRTQRP AEVPPVLCLI GRVVPIKDIK TFIRAMRRVV NRMPHVQAWV
AGPTAEDPAY ADECQNLVDS LGLQANVRFL GMQKVEELLP KVGVVVLSSI SEALPLVILE
AQAAGVPVVS TDVGSCRQLI DGLEPQDQAL GSCGRVVGIA NPEALADACL ELLSSPTQWQ
AASAAGIARV ERYYSDRLLF ERYRQVYDSA LQQSEEKH